NONHSAT113132
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113132 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1505 nt |
Genomic location |
chr6+:52442852..52448389 |
Exon number |
3 |
Exons |
52442852..52443392,52444173..52444407,52447661..52448389 |
Genome context |
|
Sequence |
000001 ACAGTTATTT CACTTCTAAA TAAATATGGT TTTTTAAAAG TGGCACGCGG TGGAATGTAA TTGAGACAGG ATGGAGTTCC 000080
000081 TAGAGAAATT TTACTTCCTC AATCTGCACT CCACCTTACT TAAAATACAG TCTTGGGTCT GTAATTCCCT TATCTGACTC 000160 000161 TCAAGGAAAT GACAAAGTAA TGCCTAGATT GGACTAAACC TCATTTAACT TCAAGGCTGA CCTTTCTCAA AGTTGAACCT 000240 000241 TCGTCTTGTG AGGAACAGAA AGATCAAGAA CTCTGAAGCA CCTCGACTTT CCACCTGTGA AGATGTGTTC AAATTTGCAA 000320 000321 CGTGCGGCCA CACCTATGAG GTTGAACTTT ATACAATTGG TTTCTTTATA GGTTTAGATG GTTGAATTTA AGTTACCCCC 000400 000401 ACTGCTATTA TTATTAtttt gagacagagt cttaactctg ttgcccaggc aggagtgcag tggcgagatc tggactcact 000480 000481 gcaacctctg cctcctggct tcaagcaatt ctcatgcttc agcctgtagc tggaactaca ggtcactccc tctggaggaa 000560 000561 accagctgcc actttgtgag gatactcata gtcctgtgga ggcatatcct ccatatggct gagacctcct gcgaacaacc 000640 000641 atcactgact tgccagacat gagtgtgcca ccttggaagc agattttcca gccccagtta agccttcaga tgacatcagc 000720 000721 ccctgctaat ctcttgacta caacctcatg agagaccctg agccagaact agccaggctt acccctcatg gttacaaagt 000800 000801 ggctgcaaca gctccaggtg ttctatcctt taacacagaa taactcaaac aacaagaccc aatattcaga caagaaggaa 000880 000881 agggactttt ggagagtgaa gaaaactttc ctagaaacct caaacttctc cccatgcctt attggccaga ttgtatccca 000960 000961 tgcccatttc taaaccaatc attggcaaag tgagtggaat tgacgtgatt agattaactt taccaagaat gcatcctcag 001040 001041 agaggctgag aaaaagtcca gcctcctttg aagagcctgg ctacctttca cctgaacaaa acaagaattc tgatgaaaaa 001120 001121 tggagaatgt atgtggagca ggcacccgga gtgtctatgc caGGATTTTT TTTCAGTGCG TTTCACCGGT TATATTTTTG 001200 001201 TCTCTTTACC TTACAAGATA TGTGGCACGT TTGCCTAAAA CAAGCCTTGC TTTCTGATTT CTGTGCACTA GGCACTTAAA 001280 001281 CCTTGCAAAT GTCGCTTACC TAACAGTCAC TGTCAAGGAG TACCTGGCTA AAGAATCTCC AGCTAGACAA AGTAGAAGTG 001360 001361 TCTGTGCTCT GGCAGTTGAA TATATTGTAT CAGGCTCAAC AGCACCTTTC ACCAAAGGAT GAGACTTCAC AACCATTAGA 001440 001441 TCTTCtttta ttttgttttt attaaaaaaa aaaattttaa CACACCATTG CTAACTTGAA GCCAT |
Predicted Small Protein
Name | NONHSAT113132_smProtein_1112:1237 |
Length | 42 |
Molecular weight | 4813.601 |
Aromaticity | 0.19512195122 |
Instability index | 51.7097560976 |
Isoelectric point | 7.67022705078 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0352214960059 |
Amino acid sequence | MKNGECMWSRHPECLCQDFFSVRFTGYIFVSLPYKICGTFA |
Secondary structure | LLLLEEELLLLLHHHLLLLEEEEEEEEEEEELLLEEEEELL |
PRMN | - |
PiMo | - |