NONHSAT113142
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113142 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
637 nt |
Genomic location |
chr6-:52552728..52568623 |
Exon number |
5 |
Exons |
52552728..52552862,52555601..52555749,52557720..52557862,52561813..52561915,52568517..52568623 |
Genome context |
|
Sequence |
000001 ATGGAGGGGA AGCCCAAGCT TTACTACTTC AATGGAAGAG GCAGGATGGA ATCCATCTGA TGGCTCTTGG CTGCAGCTAG 000080
000081 AGTAGAGGTA AGATGTGGAT TTATTCAGTG GAACCCTGAT GTATGGACAA GTGCCCATGG TCGAAACTCA TGGAATGAAT 000160 000161 TAGGTAGAAA CCAGAGCCTT CCTAAGATAC ATAGCTGCAA AATATGACTT GATTCACATG TATGTAGAAG GCTTGAAGGA 000240 000241 CCTGAGTGAC ATGATTATGT TCCAGCCACT CTCTCTGCCT GAAGAGAAGA TGAATCTTGC ATACATCCTT GAAAGAGCCA 000320 000321 CTACAAGATT ATTCCCTGTC TGTGAGAAGG TAAGCACTGA GAGACCACAG ACAAGATTTT CTTGTGGGCA ATCGGCTGAG 000400 000401 CTGGGCTGAT ACACAGCAAC CTGAAGTCAT CTTAATGACT GAAGAGTGCA AACCCAGTGT CCTCTTGGGC TTTCCTCTGC 000480 000481 TACAGGTAAT GCTATCCAAA TATATTCTTT TGCATTTTAG AAATTCAAGG CCAGAATCAG CCACATCCCC ACAATTAATA 000560 000561 AATTTCTCCA ACCTGGAAGC CAAAGGAAGC CTCCACTGGA TGAAGAATCC ATTGAGACTG TGAAGAATAT ATTTAAA |
Predicted Small Protein
Name | NONHSAT113142_smProtein_434:622 |
Length | 63 |
Molecular weight | 7126.3521 |
Aromaticity | 0.0806451612903 |
Instability index | 61.8080645161 |
Isoelectric point | 9.51300048828 |
Runs | 9 |
Runs residual | 0.00847926267281 |
Runs probability | 0.0426701211015 |
Amino acid sequence | MTEECKPSVLLGFPLLQVMLSKYILLHFRNSRPESATSPQLINFSNLEAKGSLHWMKNPL RL |
Secondary structure | LLLLLLLEEELLLHHHHHHHHHHHHHHHHLLLLLLLLLLLEEELLLHHHLLLLLLLLLLL LL |
PRMN | - |
PiMo | - |