NONHSAT113179

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT113179

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2132 nt

Genomic location

chr6-:53362940..53366148

Exon number

2

Exons

53362940..53363765,53364843..53366148

Genome context

Sequence
000001 GAGGGCTGTA ACCTTATTCC AGATATGACA ACCTATGAAC TGTCTTTGCC TTTCCTCACT AAAGTGGGGA GGCAAAACCC 000080
000081 CAATGGCGAG GCAGCAGGGG AAGAGCACTC AACTTAGAAG AACCGGGTTA TAggccgggc gcggtggctc acgcctgtaa 000160
000161 tcccagcact ttgggagtct gaagcgggca gatcacttga ggtcaggagt tcgaaaccag cctggccaac atggtgaaac 000240
000241 cccgtctcta ctaaaaatac aaaaaaatta gccgagtgtg gtggtgcagg cctgtaatcc cagctgcttg ggaggctgag 000320
000321 gcacaaagaa ttgcttgaac ccaggagaca gaggttgggg tgagatgaga ttgcaccact gcactccaac ctgggcaaca 000400
000401 gagcgagact ccatctcaaa aaaacagaag aagaaCTGGG TTCTAGTCCT GCCTTCTGCC TTCGTTACCC TGGGACTCCT 000480
000481 GGTGAGACAC TGCTATATAA AGGGAACCAG CCACCTGCCC TCCCAACACT GTATATCTGT TGCAAGGCTC AGTCACAGAG 000560
000561 GTGCTTTGAA ATGCAGACGT TCCACATGAA TATAAGTTTT GGGTTTTAAG TTTCTCTTAA AATTCCCTGA TTGGTTGAAA 000640
000641 AATCACATAC CAATCCATGA TTGAGTGATA CAGTCCTCAC ATAAATAAAA AGCCTGTTCC TCCCACTGGG AAGCATTTGA 000720
000721 GCAGAAAGTA GAATCCCTAA GGGAATGAGT CCTAATTGCA AAGGTGAGGA AGGTGCTGCA ACTTGTATGT CTGATCAAGA 000800
000801 ATATTTTGAC TTAGTCGTGA TTCTTTTTTT CCCTTAGGTT GATGAGAACA TGAAGGTAGC ACAGAAAAGA GATGCTGTCT 000880
000881 TGCAGGGAAT GTTTTATTTC AGGAAAGATA TTTGCAAAGG TATTACATTA TCTTAGATTT CTAATGTCAG CTTATGCTGC 000960
000961 AACAAGCTGC TAAAGCTCCC CTGACCCTCT TCTCCGGCAG GTGGCAATGC AGTGGTGGAT GGTTGTGGCA AGGCCCAGAA 001040
001041 CAGCACGGAG CTCGCTGCAG AGGAGTACAC CCTCATGAGC ATAGACACCA TCATCAATGG GAAGGTAGGA GGGTGGCCCT 001120
001121 GTACAGTACC CCTCACTGTG CACATCCCCC GGCAGGGAGT TCATAAAGTG TCCTGCTTCT TGTAGGAAGG TGTGTTTCCT 001200
001201 GGACTGATCC CAATTCTGAA CTCTTACCTT GAAAACATGG AAGTGGATGT GGACACCAGA TGTAGTATTC TGAACTACCT 001280
001281 AAAGCTAATT AAGAAGAGAG CATCTGGAGA ACTAATGACA GTTGCCAGAT GGATGAGGGA GTTTATCGCA AACCATCCTG 001360
001361 ACTACAAGCA AGACAGTGTC ATAACTGATG AAATGAATTA TAGCCTTATT TTGAAGTGTA ACCAAATTGC AAATGAATTA 001440
001441 TGTGAATGCC CAGAGTTACT TGGATCAGCA TTTAGGAAAG TAAAATATAG TGGAAGTAAA ACTGACTCAT CCAACTAGAC 001520
001521 ATTCTACAGA AAGAAAAATG CATTATTGAC GAACTGGCTA CAGTACCATG CCTCTCAGCC AGCCCGTGTG TATAATATGA 001600
001601 AGACCAAATG ATAGAACTGT ACTGTTTTCT GGGCCAGTGA GCCAGAAATT GATTAAGGCT TTCTTTGGTA GGTAAATCTA 001680
001681 GAGTTTATAC AGTGTACATG TACATAGTAA AGTATTTTTG ATTAACAATG TATTTTAATA ACATATCTAA AGTCATCATG 001760
001761 AACTGGCTTG TACATTTTTA AATTCTTACT CTGGAGCAAC CTACTGTCTA AGCAGTTTTG TAAATGTACT GGTAATTGTA 001840
001841 CAATACTTGC ATTCCAGAGT TAAAATGTTT ACTGTAAATT TTTGTTCTTT TAAAGACTAC CTGGGACCTG ATTTATTGAA 001920
001921 ATTTTTCTCT TTAAAAACAT TTTCTCTCGT TAATTTTCCT TTGTCATTTC CTTTGTTGTC TACATTAAAT CACTTGAATC 002000
002001 CATTGAAAGT GCTTCAAGGG TAATCTTGGG TTTCTAGCAC CTTATCTATG ATGTTTCTTT TGCAATTGGA ATAATCACTT 002080
002081 GGTCACCTTG CCCCAAGCTT TCCCCTCTGA ATAAATACCC ATTGAACTCT GA
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Predicted Small Protein

Name NONHSAT113179_smProtein_953:1165
Length 71
Molecular weight 7907.7752
Aromaticity 0.0857142857143
Instability index 53.1971428571
Isoelectric point 9.60650634766
Runs 11
Runs residual 0.0123055162659
Runs probability 0.0462735462735
Amino acid sequence MLQQAAKAPLTLFSGRWQCSGGWLWQGPEQHGARCRGVHPHEHRHHHQWEGRRVALYSTP
HCAHPPAGSS
Secondary structure LHHHHHLLLLLLLLLEEEELLLEEELLLLLLLLEELLLLLLLLLLLLLLLLEEEEEELLL
LLLLLLLLLL
PRMN -
PiMo -