NONHSAT113257
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113257 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1226 nt |
Genomic location |
chr6+:56924096..56933175 |
Exon number |
3 |
Exons |
56924096..56924235,56931260..56931740,56932571..56933175 |
Genome context |
|
Sequence |
000001 AATTACATAT GTGGGCCAGG CGCACTGGCT CATGCCTGTA ATCCCAGCAC TTTGGGAGGC CGAGGTGGGC GGATCACAAG 000080
000081 GTCAGGAGAT TGAGACCATC CTGGCTAACA CGGTGAAACC CCGTCTCTAC TAAAAATACG GAAGGGCATT TGTTTTGTTG 000160 000161 GGATAGCTAC ATAACAGTCT GATACTGAGT CTTATGGTTT ATGCTAAGTG GTTCTTCACA AGTTTCCTTG GTTTTCCTGG 000240 000241 CTGATAATGT TTGCATAGAG GACAGACAAA AGGGGGCTGG AACTGACTTG TTAAAAATAG ACGTAAAATG AATTCTGTTT 000320 000321 TCAGCTGTCA CTGATGCTCG CAACTGCATG TGATGTCCTG GGCCATGGGT GAATCCTTTG AACTTAATGC AGAGAATGTC 000400 000401 TTGTGAGTAG ATATGTGGAG ATGTGCGTAT GGAGTCTTTC AGCCTTTCTG TTAAGTGGCA CCTTACCTCC ATCATTCATT 000480 000481 GTATGCGGTG TCATAGTTCT GAGTCCTTCC TAGGTTCCCT GGGGCAGACT GGTTAGCTGC CTTTGCCCTC TGAAATAAAT 000560 000561 TACTACTTCT CCACCTACTT TTGTCTTCCA AAGCTTTCTC AGATGTCTAG TGGATATAAT ATATCTTTAC AAAACTTATT 000640 000641 TTTTCAATCC AATAACAAGG TCAGCTTAAC ATATACTTTT TCTTTCTCCT TAGTAAATAT TTGCATTTTT CAGGTAGGCC 000720 000721 CTACACACTT ACTAATTTAA TTTCTGTGTA TTTTATATGT TCTTATTTTA CATGTTGCTA TTATAAATGG GACATTATTT 000800 000801 TATTTTTATA GTTGACTATT GCTATATAGA AAACATATAT TTATGTATTC CTTTTTAAGT GTCCAAATTA CTTTTTTTGA 000880 000881 TTCAAGTGGG TTTTCTGGGT AGAGGAAAAA GTTTCTCTTT CAAATAATGA TCATTTTACC TCCTCTAACA TTTATGACTA 000960 000961 GTATTCTTTT TCTTATCTGA TAGCATTGCT TATGACTTCA GAAATAATAG TAGTGGTTAC AAATATGTTT ATTTTATCCT 001040 001041 TCACTTGAAT AGGAATGTCT TTAGGATTGT TATGACTGAT ATTTGTTGGC TGCACATAGA CATTCTTTAA ACAAGTGTCC 001120 001121 CACTGACTTG TGTTTTGCTT TTGCTGCTTT AAGCTAGAAT GTCCCAGGTA GTACACACAC AATCTCTCTC ACACACACGC 001200 001201 AACTCTCATA ATACACTCAT GAAAAG |
Predicted Small Protein
Name | NONHSAT113257_smProtein_602:739 |
Length | 46 |
Molecular weight | 5087.8214 |
Aromaticity | 0.155555555556 |
Instability index | 59.1422222222 |
Isoelectric point | 7.95684814453 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0287493375729 |
Amino acid sequence | MSSGYNISLQNLFFQSNNKVSLTYTFSFSLVNICIFQVGPTHLLI |
Secondary structure | LLLLLLEEHHHHHLLLLLLEEEEEEEEEEEEEEEEEEELLLEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooo |