NONHSAT113463

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT113463

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

695 nt

Genomic location

chr6+:71874779..71875473

Exon number

1

Exons

71874779..71875473

Genome context

Sequence
000001 ATGTGCGGCA ATAACATGTC AACCCCGCTG CCCACCATCG TGCCCGCCCC CCGGAAGGCC ACCACTGAGG TGATTTTCCT 000080
000081 GCATGGATTG GGAGATACTG GGCACGGATG GGCAGAAGCC TTTGCCGGTA TCATAAGTTC ACATATCAAA TATATCTGCC 000160
000161 CGCATGCGCC TGTTAGGCCT GTTAACATTA AATATGAACA TAGCTATGCC TTCATGGTTT GATATTATTG GGCTTTCACC 000240
000241 AGATTCACAG GAGGATGAAT CTGGGATTAA ACAGGCAGCA CAAAATATAA AAGCTTTGAT TGATCAAGAA GTGAAGAATG 000320
000321 GCATTCCTTC TAACAGAATT ATTTTGGGAG GGTTTTCTCA GGGAGGAGCT TTATCTTTAT ATACTGCCCT TACCACGCAC 000400
000401 CAGAAACTGG CAGGTGTCAC TGCACTCAAT TGCTGGCTTC CACTTTGGGC TTCCTTTCCA CAGGGTCCTA TCGGTGGTGC 000480
000481 TAATAGAGAT ATTTCTATTC TCCAGTGCCA CGGGGATTGT GACCCTTTGG TTCCCCTGAT GTTTGGTTCT CTTACGGTTG 000560
000561 AAAAACTAAA AAACATTGGT GAATCCAGCC AATGTGACCT TTAAAACCTA TGAAGGTATG ATGCACAGTT CGTGTCAACA 000640
000641 GGAAATGATG AATGTCAAGC AATTCATTGA TAAACTCCTA CCTCCAATTG ATTGA
[back to top]

Predicted Small Protein

Name NONHSAT113463_smProtein_317:538
Length 74
Molecular weight 8598.0653
Aromaticity 0.191780821918
Instability index 43.797260274
Isoelectric point 6.23870849609
Runs 13
Runs residual 0.0339372514361
Runs probability 0.0456021632493
Amino acid sequence MAFLLTELFWEGFLREELYLYILPLPRTRNWQVSLHSIAGFHFGLPFHRVLSVVLIEIFL
FSSATGIVTLWFP
Secondary structure LHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLEEEHHHHHHHHLLLLLEEEEEEHHHLHHH
HHLLLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHH
HHHHHLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTT
TTTTToooooooo