NONHSAT113500
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113500 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
662 nt |
Genomic location |
chr6-:72110768..72186527 |
Exon number |
4 |
Exons |
72110768..72111117,72182834..72182983,72183744..72183867,72186490..72186527 |
Genome context |
|
Sequence |
000001 GAAGCTTTGA TTTTACCTGT TTTTATACAC TGATTTAAGA GAGATCAACA GCAGTGTATT AGTCATATGT ACTCACAGAC 000080
000081 CACGGGAGAG GGACACCATG CCAACAGGGT CACATGGAGC CTGTGCTCAG GAACAGAGTG GATGACAAGG ATTGTGGGAG 000160 000161 GCGAGATACA GGGGTTAGAG CACAAATTGT GCAGTGCCCC TTAGCATTTG ATTTTTACTG AAAGATGGGA ACCCAGAAAA 000240 000241 GGGATGTGGG TAAAAGAATG GCCTGCTATT TGACCAACTT TTCTTTTCAT CTCTCGAAGA GCCTAGCAAA GTACCACTAC 000320 000321 GTGGACAGAG TTACCATGCA TGTGCTTAGG TAAGATAAAC TAATATTTAA CATAAATTAG AAACCCTTAC TAATTGCTTT 000400 000401 CATGTGTTTT TTTTCTTACT ATAATTTTTA AAATTTCACA TATCAGCATA ATAAAATATC TATAAACTAA AACATAAAAT 000480 000481 TCTTAAAATG GACTGTAGTA AGTCAGTTAC TGAAAATAAA ACACTGTCAA AATGTGTTAG TTAAATGTAA TGTGAGTGTT 000560 000561 GCTATAAAGT TAGTAATGTT TAAAAAATAG CACCACACTG AGTAATCATC AAAAGTATTA TACATTTAGT TTTTATTCAT 000640 000641 GATTTGCCAA AATAAAAATT GG |
Predicted Small Protein
Name | NONHSAT113500_smProtein_224:352 |
Length | 43 |
Molecular weight | 4989.8263 |
Aromaticity | 0.119047619048 |
Instability index | 47.8976190476 |
Isoelectric point | 10.1292114258 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.038715185774 |
Amino acid sequence | MGTQKRDVGKRMACYLTNFSFHLSKSLAKYHYVDRVTMHVLR |
Secondary structure | LLLLLLLLLHHHHHHHHLLLHHHHHHHHHHLEELLEEEEEEL |
PRMN | - |
PiMo | - |