NONHSAT113600
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113600 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1676 nt |
Genomic location |
chr6+:75964562..75968710 |
Exon number |
2 |
Exons |
75964562..75966022,75968496..75968710 |
Genome context |
|
Sequence |
000001 CAAACAAGTT ACAGCATTTA TTCAATAAGG aatattaaaa taattcatta gtaaaaaata aaataaCTTC AACCATATAC 000080
000081 ATATTATAAT TTATCATGTA CATACTCCAA AATCCCCATA ATTTAATTAG GAAATTTATA GAACATCTTT TTAAAGTATG 000160 000161 TCTTAGGAAA ACCAACCAAA ACAATTGGTG CCTTAACTAA AGAGAATGTG CATACACATT GCTATTTGAC CTATATGCAA 000240 000241 AAGTGGAATG AAATACATAG GAAATTAAGG TTACTGCTTT CAAAAATTTC TGGAATATTA GTACTTAAGT CAAAACACTT 000320 000321 ACCTGCAGAA TAAAAACAGC CTGAGTATTT CCAAAGCTGA AGTAATTTTC TGAATGTTAA ATATCACAAG AATGAAAACA 000400 000401 GTCTCCATTA AGCACTTACA TGTGGTTTAC AGTTGAGGCA GAAGATGAAG GTCTGCCAAG CAGTTTTCCC ATATCACCTG 000480 000481 AATTCTTTCT TCCCTTATAA AGTATAAGCT TCAAGGGAAA TGATTACATA TAAAAACATT CCAAGTGAGT TGGGGTTCCT 000560 000561 GACTGCAACA TTCAACCAAA CGGAAAGAGG AATTTTTTAA TTCTCCTAAG CAGGACCTAC CCAACCACTG CAGACATGAG 000640 000641 CATTAATTCT TATGCCAGAC AAGGTAAGCG TGTCCTTTGA AATCAAAGCT AAGCTTGACA AATAACTGTA CTGGATAAAC 000720 000721 TGGATACATG AACCACCTCA ACAAAGATGG TACTTTAAGC ATTTATACAC ATGAAAATGA TGAAGTGTAT TATTTAGATA 000800 000801 TGGTCTTTCT TCATCTTTCT CTGAATCCTG AAAGGTTAGC AAGTCATTAT ACTCATACAT CTTGTAATCC CTTTCTCCAC 000880 000881 AAAATACATA CACATATACA GCTTCATATG TCAATATAAT ATCATCAACA CAGCATAAAG ATTTAAGCAG TAGACACAAG 000960 000961 TCACATGAAA GAGGCTCTAT GCATCATGTG GCCTGTCCGA ATAAAAAGCA AACATTAGAA TGCCATTTCA GCAGTTACAG 001040 001041 TGTTGATATG ATCAATATAG CTAATTTTTT TATACCCGTC ATATATTTTT AGAAGTCATC CGTAGGGAAG AAGCAAACAA 001120 001121 CAAAGACTGC TTTTTTTTAG AAAAGTTATG TGCCAACTTC AAAATGACAT ACTAACCAGA TATCAGCATT CGAAAGCTAG 001200 001201 GTTGAATAGG ACTGGCCTTG ATGCACATGC AGATGATTTG CTTTCATAAT ATAAAATTAA ATGGTAATGT CAGCTGTATT 001280 001281 ACTACTGTTT CTATATTTAT GATTAATTAC TAGCAGTACA ACTCCCAGAA GGAAGGAGAT GGATCCAACA GCGATGTAAG 001360 001361 CAATCCCCAA AAATGGATTT TTTCCTCCCA TCCATGAAAT AGTGCTCAAG ATCATCCGTT TTCGTCCATC AAAATAATGT 001440 001441 ACAGGGTAAT CTGAAGAGGG TTGTATGTGA CATTCAAAGA GTATCGGCCA GCTGGTAATG TTGGATGTAA ATCACTTTTC 001520 001521 CTTTCTATAA GACGATACAA CTTGCGAAAA GTAGGTAATG CTGCAGTACG CATCCAAACA ATAAAATCCT CATTTATGAA 001600 001601 TCCATTATTA TCTGGGTCAG AATCCAGCAT GTAAACTGGT TTAAGCCAGT TCACAGGCTT TGTTGTACCT TAAAAG |
Predicted Small Protein
Name | NONHSAT113600_smProtein_95:199 |
Length | 35 |
Molecular weight | 4242.9936 |
Aromaticity | 0.117647058824 |
Instability index | 49.1352941176 |
Isoelectric point | 9.69622802734 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0131248895955 |
Amino acid sequence | MYILQNPHNLIRKFIEHLFKVCLRKTNQNNWCLN |
Secondary structure | LEEELLHHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |