NONHSAT113602
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113602 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1297 nt |
Genomic location |
chr6+:75994730..76001580 |
Exon number |
3 |
Exons |
75994730..75995025,75999970..76000054,76000665..76001580 |
Genome context |
|
Sequence |
000001 AGAGCTACGG TGACACTTCG CGTGCGGTGT AGGCGCATCT TCGCTCTGTT GGCCGTGGCT TTAGTAAGCA CACACCTGCC 000080
000081 TGCTACTCTG GTTATCGTGG CGACGGCAGG TCTGGATTGC CAGACAGGTT TTTCTTTTTA CCTCGAGGCT TTCTCTGAAG 000160 000161 GGAGTCGGAG CATTTAAAAG GCGGCCTCAA GGTGGATTGA GTCGGGGGAG GATTAGCAGT ATTTGCTTAG GTTGTAAAAC 000240 000241 CGCGACTTTA TCTAATAAAT CGCCATTCAA GGTGCAAATA CAAACTTGGA ACAGAGATGT AAATGAATTC CTCAAGGTCA 000320 000321 GAGACTGTTT TTATTCATTT CTACATCTCC AACACCTGGC AAAGTGCCTC GGCCATAAAA GATAATCTGC CTCTGAAACC 000400 000401 TTCCGTGGGC ACAGAAATTT CTGCAAGGAA AGCATCAGCA ACCAGAATAA TTTGGTGAGG AAGATTTGGC ACAGAATACC 000480 000481 CTGACTGAGG TATTGCTCCA AAAGGAGCAA TCCTCTGGGG TTAGGAGTCA ATTATTAGGT GCCTACAAAA CACTCTGTTA 000560 000561 TTTCGACTAA ACATGCCTTG CTGTCAAGGA GAAGAAAGAA CTGTGCACTG AAAACCAGAA CAGCCAAAAA AGAATGTGGC 000640 000641 TGTGGTCATG GGAAAGGTCT TTGAATAACA GGGAAAAGGA GACAGGGCAG TTGAAGGAAG GATAAGAAAA GGCTACTTCC 000720 000721 TAGCAGGAAT TAATAAACTA ATGTTTTTAT TATTTAATAG AAACCCATTC CTTTCTTTCA AATAAGGCAG AGATAAGTTA 000800 000801 GGATTGGATG TAGCTATATA GATCCCTATT TCTGGCACAG GCTGATAGCA ATAAAGGAAG TCAGAACACA ACCCCACTCT 000880 000881 CACCCACATC CCACTTTGCA AAAACCATGA CCCAAATGCC TCTGTAGATA CTGGGCTGTG GACTGCTGGC AAAGCCTCAG 000960 000961 GAGCCTTTGC TCTACTGAGT GATCTACCTT TAGATTGACA GCAGCGGCTG TGGAGTAACA TCTGAATGTT GATTGACAGT 001040 001041 GCAGTTTGTG GGAATAAAGC AGGGAGGGAA ACCCTTTAAC CAGTTTCCAT TTCTTGGTGT CTTAAAGTTT TCATCTTACT 001120 001121 AAAGAATCAA ACCGTTGTGT AATCCAGAGG AAGAGCATCC CTCATCCTGG CAGCCCTGCT CTACCACATC TGCCTATCCA 001200 001201 TAGTGAAAGA CACCATATTT TTAAGAAAAT ATGAAATGCA GAGATGAAAA CTATTTTGGA GCAAATGATT TTAAATAAAA 001280 001281 AGGTTGCATA CTCATTT |
Predicted Small Protein
Name | NONHSAT113602_smProtein_302:457 |
Length | 52 |
Molecular weight | 5711.4229 |
Aromaticity | 0.0980392156863 |
Instability index | 47.5001960784 |
Isoelectric point | 9.98797607422 |
Runs | 10 |
Runs residual | 0.0418365365948 |
Runs probability | 0.0465642112701 |
Amino acid sequence | MNSSRSETVFIHFYISNTWQSASAIKDNLPLKPSVGTEISARKASATRIIW |
Secondary structure | LLLLLLEEEEEEEEELLLHHHHHHHHLLLLLLLLLLLEEEHHHHHHLEEEL |
PRMN | - |
PiMo | - |