NONHSAT113906
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113906 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
781 nt |
Genomic location |
chr6-:88154113..88154893 |
Exon number |
1 |
Exons |
88154113..88154893 |
Genome context |
|
Sequence |
000001 GAAAGGGGAG ATGAAAATGC AGCTATAACA GATGATGGAT TACGCAAATG ATAAGAAAGT GGCTGCCACT GAAGCCCTAA 000080
000081 ATGATGGTGA ACCGTAGAAA GCCATTGACT TATTCACAGA TGCCTTCAAG CTGAATCCTC TCTTGACCAT TCTACATGCC 000160 000161 AAAGAGAGCC AGTGTCTTCA ACGAATTACA GAAGCCAAAT GCTGCCATCT GATATTGTAA CAGAGCCATT GAAATAAATC 000240 000241 CTGATTCAGC CCAGGCTTAC AAGTGGTGAG CCTTACAAGC GCTTTTCACA CACAGACTTC TGGGCCACTG GGAAGAAGCA 000320 000321 GCCCATGATC TTGCCCCTTG TCTGTAAATT GGATTACAAA GATGCTAGCA CAATGCTGAA AGAAGTTCAA CCTAGGGCCT 000400 000401 AGAAAATTGC AGAACATCAG AGAAAGTATG AGCAAAACCA TGAAGAGTGA GCGATCAAAG AAAAAATAGT TAAAAAGGCT 000480 000481 CAGAAAAGAG CATGAGAGAG CCCAGAGGGA TCAGGAACTC AGTAGGCTCT CTTTTCCAGC TGGCTTTCCT GTGGGAAGGC 000560 000561 CTGTTAATGT TCATGAAGGA ATGCCTGGAA TGGCAGGAAT GCCTGAACTC AATGACATTC TTAGTGATCC AGAGGTTCTT 000640 000641 GCAGCCATAC AGGGTCCAGA AGTTATGGTG GCCTTCTAGG ATGTGGCCTA CAACCCAGCA AGTATGTCAA AATACCAGTA 000720 000721 AAATGGAAAG GTTACAAATC TCATTAGTAA ATTGTCAGCC AAATTTGTAG GTCAAGCGTA A |
Predicted Small Protein
Name | NONHSAT113906_smProtein_491:769 |
Length | 93 |
Molecular weight | 11113.0242 |
Aromaticity | 0.119565217391 |
Instability index | 43.1163043478 |
Isoelectric point | 9.19866943359 |
Runs | 12 |
Runs residual | 0.00477009696591 |
Runs probability | 0.040224047577 |
Amino acid sequence | MREPRGIRNSVGSLFQLAFLWEGLLMFMKECLEWQECLNSMTFLVIQRFLQPYRVQKLWW PSRMWPTTQQVCQNTSKMERLQISLVNCQPNL |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHLLL LLLLLLLHHHHHHLLHHHHHHHEELEELLLLL |
PRMN | - |
PiMo | - |