NONHSAT113988

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT113988

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2083 nt

Genomic location

chr6+:91211779..91213861

Exon number

1

Exons

91211779..91213861

Genome context

Sequence
000001 cctgtaatcc cagctctttg ggtggccaag gtggaggatt acttgagccc agaagtttga gatcagcctg ggcaacatag 000080
000081 ggaaactctg tttttacaaa aaattgaaaa attagctggg tgtggtggca tgtgcctgta gtcccagcta tgtgggaggc 000160
000161 tgaggtggaa ggatcacttg agtccaggag gctgaggctg cagtgagccg tgattatacc actgcactcc agcctgggca 000240
000241 agagggagcc cttgtctcaa aaaacaaaac aaaacaaaac aaaaaataaa aggaaaaaaG TACAAAATAA GACATTTTTT 000320
000321 CTCTCAAATA ATCAAAGAAT TGTCTCTGAG TTGGGGCAAA CTTGGCTGTT TCATTTTGAT GAACCTGCCT CTTGCTTATC 000400
000401 CACGGAACAG TCTGCTACAA CAGCCTGCTT GAATACTTTG CATTTCGGAC CAACCACCTC CACATTTGTC ATTATGACAG 000480
000481 GTTGTTATTT ACGGGGAATG GCAGGTTGTT GAAATCCTAA ATGAAGCACT AAGGAATGAA GCTCTAAGGA CCAATTATAG 000560
000561 CAACAATGCT TAAACATTTC AGGCAGCAAA ATTGGCTCAG CTACAAGCTT GTTTAGGCAA GAAAAAAATG CATATTTCCT 000640
000641 ATATTTTTGA TTTATAGACC AACCCAAAGA GTGTGTGATT TCTGTTGATT TTAACATAAA GTCACCTAAA TTAGGAGTAT 000720
000721 GCAGTTTTAA CTGCAATAGT TGGCATGGCT AATATGGGAA AAAGTAGATT AACCCGATGC CTCCCAAATG TGCAAATATG 000800
000801 CTAAGCCATG TTTAAAACTA AGGTAACTCT CTAGGGTAAT TTTTCTGGTC TGCTGTGATG TCCCCAAGTG GCTGGCAAGT 000880
000881 GTCATCTATT GGCAAGGCCT GAACAAGAGC ACAGCAGGAA ACTTTCCCCT TATCTGTTTG AATGAATGAC TAAGCAAAGT 000960
000961 TTAAAGGCCA TTTCACTCTG CTCTTAAAGG TATGTGAGCA TGAAGATGAC ATGCTCCTTT GGTTCCCAGT TTCAGTGTCT 001040
001041 GATCAGTTAG GCATAAAGGT GCTTTTGTCT ACACAGGTTT CATGTGTGTG TTCTGTTGAT GAGTCTGTTG ACAACTCCAT 001120
001121 AAACTAAGTG TCTCCAAGGC AGGCAGAGAT TGAGATTTGT TTCTCAGAGA TTAATGAATG TGCCTCCATT TCTTTCCCTC 001200
001201 AAAAGAGACA ATACCACTTC CTGTAGCTTT CCTTGCGTGC TTCAGATTGA AAACCTTATT GGGCTGCAGA AAGATTTATG 001280
001281 ATTCACGTAT ATGTCGGTGG CTATTACTGT AGAATAATCT GGAAAACTGC TAGTCACAAT TTGTTCCCTC TCAATGGTTA 001360
001361 CCGACTGATT CATTATGCTG GGCTCTTGTG TCTTCTCTCC TTCCTTCACA TCTCTCCTCA AAATGTTAGA TTCTTTGCCA 001440
001441 CACTATTTAC AGACTGTGGT AAATATAGCA GGTTGATATC AGGGTCACTT GTATTATATA TGCTATAATG CCTACACCAT 001520
001521 GTATTTTTAT GTCAAGTGAT TAAGAAATGT ATAAGAAAAA TGGTAATAAG CTCTCCATCA CCATCCACCC TTCCTGGGAT 001600
001601 AAACACTGTT AAGAGTATCC TTCTCTCTTG TTTTCTGTAT TCATATGCAT GTCATATTAT AATTTTTTGT CTTGCTTAAC 001680
001681 AGTTTTTTTT GACCTAAATA GTATATTTGC TCTTCAATGT CCTATTTTCA TGTAGCAATA GGTCACAGAC ATCCATCTAG 001760
001761 ATCTCTGTAT ATAGATTGAA TGCATTCCTT TAAAAAACAT TAatttacca taattgattc aatctttccc ctactgatag 001840
001841 acatttttct tgttgaggtt atttttttaa taaaaaattt gggggccatt atacacagtg tttcaaataa cttcttggta 001920
001921 tctatgtctt tacatacaga tattcttaag gctatagatt tttcaaagta ggaatgttgt gtccaagggt atatttttac 002000
002001 ttttaatCGA GGCTTGTTTT GTTATATTTA ATACTTTCTA AGtaataaat acaacaaaat aatataatta tatataatat 002080
002081 aat
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Predicted Small Protein

Name NONHSAT113988_smProtein_1277:1507
Length 77
Molecular weight 8791.3621
Aromaticity 0.171052631579
Instability index 46.1947368421
Isoelectric point 9.40899658203
Runs 16
Runs residual 0.0691167574108
Runs probability 0.05221581876
Amino acid sequence MIHVYVGGYYCRIIWKTASHNLFPLNGYRLIHYAGLLCLLSFLHISPQNVRFFATLFTDC
GKYSRLISGSLVLYML
Secondary structure LEEEEELLLEELEEHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHLL
LLLEEEEELLEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHH
HHHHHHHHHHHHHHHL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTT
TTTTTTTTTTTTTTTi