NONHSAT114079

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT114079

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

8380 nt

Genomic location

chr6-:97706539..97720981

Exon number

5

Exons

97706539..97709850,97711211..97715878,97717778..97717868,97720580..97720757,97720851..97720981

Genome context

Sequence
000001 TAATTATTTG AACTATGATT AACATTGTCT ATTTTGGTTT CAGGGAAGGT ATCAACTCTA CACTGCAAAG CAGACAATAT 000080
000081 TAGGCAGCAG TGTGTACTAT TTCTCCATTA TGTTAAAGTT TTCATCTTCA GGTATCTGAA AGTACAGAAT GCTGAGAGTC 000160
000161 ATGTTCCTGT CCATCCTTAT GAGGCTTTGG AGGCTCAGCT TCCCTCAGTG TTGATTGATG AGCTTCATGG ATTACTCTTG 000240
000241 TATATTGGAC ACCTATCTGA ACTTCCCAGT GTTAATATAG GAGCATTTGT AAATCAAAAC CAGATTAAGC TTTTTCCACC 000320
000321 GTCATGGCAT TTATTACATC TCCACTTGGA TATACATTGG CTGGTGCTAG AAATTCTTTA CATGCTGGGT GAAAAATTGA 000400
000401 AACAAGTTGT ATATGGTCAT CAGTTTATGA ATCTGGCAAG TGACAATTTA ACCAACATCA GCCTATTTGA AGAACATTGT 000480
000481 GAAACTCTCC TTTGTGATTT AATAAGCCTG TCACTCAACA GGTACGACAA GGTAATGCTT TAAGAGTTTG TATTTTTGAG 000560
000561 ACTTAAAGAC AGTATTCAGT CCTTAATGCA TGTCGTTTAA TCTGTAAGAA TTTAAACTAA AATGCTTTAT ATGTTCTAAT 000640
000641 TTTATATTTA GTTGCTATTA TCTGGGAGCT GAAAGGGAAA ACAATTTTTA TTTAAACATC TAAAAGAGGC TGGAATTGGT 000720
000721 ATTTTAGAGC ttttcttttt ttcttttttt tttttttttt AAGAAAAATA GCCTTTTCTA TTTTGACAAA AATAAATAAA 000800
000801 TAAAAATGAT GTTTACCGAA ATCACTGGAA GCCTAATTTC TATCCAAATA GTAGAGGCCA GCTCTTTAAT AATGTATTGT 000880
000881 ATTACTGTTG TGTAATAATA AAATAAATGC TTACTTAAAG TTACTTTACA CATTTTAAGA GAGGATTTTC TTGCTTGTTT 000960
000961 TCATAAAAGG TCTCGAATCT GGGTAAAATT ATGTGTTTTT ATTAAATTAT GTTTATCATA GAGTGTTTAA TGGAGACAGT 001040
001041 GATTTAAAGG TGCTACAGAA CATGTTTATT TTTAAGTAGT ATAAATGTTT GTAGAGTATT ATCTGTTATT TTAGATTACA 001120
001121 AGCGTAAAGA CTGTTTTTGG GAAATCAAGA TTGAGGGAAA AGGAGTTTTA TAATTTTTCA AAATTTAGAT TTTTTTATGC 001200
001201 ATTATCAATA TTTTTACAAT TTAGTGTGTA TGTGTATTAG TGGATTAACC AGATATGATA GAATAACTTT TAAATATTTA 001280
001281 TTTAtttttg ttaattgaca aaattataca tatttatcat atacatcatg ttttgatatg tgtatacagt gtagaatggc 001360
001361 taaatatagc taattagcat atgtattatc tcacattctt attttttgtg tgagaacact taaaatctat gcttctagtg 001440
001441 attttcaaga atacaatata gtacattgtt tttaactgta gtcatcatgt tgagcttatt cccttatcta actgaaattt 001520
001521 tatatgcttt gatcaacatc taccccgcct ccctcctaat cctcctcaca gcccttggta aggatcatct tactctgctt 001600
001601 ctatgagttc agctttttta gattctacat ataagtgaga ttatgtgtta cttgtctttc tgtgcctggc ttatttcact 001680
001681 taatttaatg tcctccaggt tcatccatat tgttgcaaat gacagcattt ccatcttctc aaggctgaat agtaGGgtca 001760
001761 tacactgtgt aacaaagttt tagtcagtga cagaccacat atacaaggta gctataccac atagcctagg tgtgcagtag 001840
001841 taggctgaaa aagtttaagt acaataaatc atgttagcct aaagacgtgc ttctcagaac atgtcctgct gttaagtgac 001920
001921 acatgactgt attccattgt gtatataaac cacattttct ttatgcattc atctgttgat ggacaatttg gttgattcca 002000
002001 tgtcttggct cttataaata atgctgcagt gaacatggga atgcagatat ctcttaaaca tactaatttc attttctttg 002080
002081 caaatatacc tagtaggatt gctggatcat gtggtagttc tatatttaat tttgtgagga atttgcatac tgtattacat 002160
002161 gatggctgta ccaatttaca ttctcaccaa actgtgcaag ggttttcttg tcaccacttc ctctctggcg cttattatct 002240
002241 tttgtctttt tggtaatagc cattataaca ggtttgaggt gatatcttat caagttttaa tttgcatttc cataatgagt 002320
002321 agtgacgttg agcatttttc atgtactgct tgcccatttg tatgtcttct tttaagaaat gtcagctagg cgcggtggct 002400
002401 cacgcctgta atcccagcac tttgggaggc cgaggcaggc agatcacaag gtcaggagat cgagaccatc ctggttaaca 002480
002481 tggtgaaacc cgtctctact aaaaatacaa aaaattagcc gggcatggtg gtgcgtgcct gtagtcccag ctacttggga 002560
002561 ggctgaggcg ggagaattgc ttgaacctgg gaggcgcagg ttgcagtgtg ccaatattgc gatattgtgc cactgcactc 002640
002641 cagcctggca acagagagag actctgcctc aaaaaaaaaa aaagaaaaaa gaaaacgtct gtttatattt tttgccaatt 002720
002721 ttgtaattgg gttgttttct tgctattgag ttgtttgcgt tccttatata tttaaaatac taacccctta tcagatgtat 002800
002801 ggtttgcaaa tattttcttc cattctcgag attttccctt cattccgttg attttttttc ctttgctttg cagatatttc 002880
002881 ctttttattt tgatataatc ccatttgtca gttttcattt tcatggcttg tgctttttgg ggtcatatcc aagaaatcat 002960
002961 ttaccagacc attgtcatat agcttttccc ctatgttttc ttctagtttt atagtttcag gtcttacatt taagtcttta 003040
003041 atttattttg agttgatttt tctgtatggt gtgaaacaag ggcctaaatt cattctgtat gtggatatcc agttgtccca 003120
003121 acctgtttat tgaagaagct gtcctttccc cgtgtcatgc tcttttcatc attgtcaaaa atcaattgtt ctgttttgtt 003200
003201 ctgtgtctgt ttgtgtgcta gcagcacact gttttgatta ctgtagcttt gtagtatatt ttgaagtcag gtagtgtcat 003280
003281 gcctcgagct ttgttctttt ttgctaaaga ttgctgggtc tattcaggac cttttgtgat ttcctaccaa ttttaggatt 003360
003361 gttttttcta tttctgtaaa aaagtgtcat taaatatttt ggtagggatt tcattgaatc tgtaggtcac tttgggtagt 003440
003441 atggacattt taacaatatt tcttccaatc catgaccaca agatattttt tctacttact tgtgttgtat tcagtttctt 003520
003521 tcatcagtgt tttttatttt tcagtgtata ggccttttac tctttggtta aatttatccc taagtatttt tatttttgta 003600
003601 ggtatatact atatatggga ttgttttatt gatttctttt ttggatagtt tgttgttatt gtatagaaat gctatggtat 003680
003681 tttgtatgtt gatttttgta tcctgcaact ttactgcatt tatttattca aataattttt ggtgatgtct ttagaggttt 003760
003761 ctatatataa aagatcatgt tatctacaaa cagcaacaat tttaacattt ctttctgttt agatgccttt tctttctttt 003840
003841 gcataattgc tgtggctagg atttctagta ACATCCTAAT ACTTTTTTTT TAACTTTGTA TTAGGTTAGA AAAGTGTACA 003920
003921 TAACTTACGT AAAATATTGC ATACATTATT AATTTAAGAA GCCTAGCTAT ATTTGCAAAT ATAGTGTACA TTCTGTGCAT 004000
004001 TATCTAGGGC TGCTGAGGAT TTTTTTATTA AAAAAAGGTA GATAATTTAG AAATTACTGA ATCTTTATAA ATCCCTAATA 004080
004081 ACTGTATTCA TTCTGTCTTG CAAAATTTTT ACTCTGTTTA CAGTGAATCA AAATTTATTT TCTAATCTTT TCATTAGAAG 004160
004161 TCTTTTGTTG TAGATGACTC AGGGCAAAAT AAgcaaacta gccctgaggt gtaatctagc ccattaccta tttttgtaaa 004240
004241 tatagtttta ctgggatata accaggtcca tttctcttac caggtatctg cggctgttgt actgaaatgg cagagttcag 004320
004321 tagttgtgac agagactgta ttgacaacag actcttaaat atgtcctatc tggcccttta tagaaaaagt ttgcTggctg 004400
004401 ggcgaggtgg ctcatgcctg taatcctagc actttgggag gccgaggcgg gtgtatcacg aggtcaggag atcgagacca 004480
004481 tcctggctaa cacggtgaaa ccccgtctct actaaaagta caaaaaatta gccgggcgtg gtggtgggcg cctgtagtcc 004560
004561 cagctacttg ggaggctgag gcgggagaat ggcgtgaacc tgggaggcgg agcttgcagt gagccaagat cgctccactg 004640
004641 cactccagcc tgggtgacag agcgagactc catctcacaa aaagaaaaaa aaaagagaaa GTTTGCTGAC CACGGCACTA 004720
004721 GATGATTAAA ATTTTTTTTT AAGTTGAAAT CAAATTAATC TGTGCTTTTT GTTTTAAAAT GGAAATTTGT CTTAAAAGTT 004800
004801 AAATGAAATT GCACATTTTC AATAAATAAT TTTGTCTAAT TGAGAATAAA TTCTTAGTCA TCTAAATCAT TCTTTTAAAA 004880
004881 GTATTTGAAA GATATATGGC ATTTAAAATT CTGCTGCTGT CTTATAAATA ACACATTTTG GTTATTTTCT ATAGGTTAGG 004960
004961 TCTTCTGAAT CATTAATGAG TGACCAGTGT CCATGTTTAT GCATTAAAGA ATTATGGGTT CTACTTATTC ATCTTCTAGA 005040
005041 CCACAGAAGT AAATGGTTTG TCTCGGAACC CTTATGTGGG TTTACAGACT GAGTTCATGT TACCTAGATT TTATTAAAAA 005120
005121 TTTCAAACCA ttgagcccag gatatcgagg atacagtgag ccaagattgt gccactgcac tccagcctgg atgacaaagc 005200
005201 aagaccctct cttgaaaaaa gaaaaaaaaa TTTCAAGGCA TTGAATTCTG GGTAGCCAAG AAAAATGGAT GGATGCCTAA 005280
005281 ACCCACATCT CCCTACATAA CCTTCCAACA AAATATAGAA CAGCAAAATC AAATATATCT ACTgttgact cttgaacaat 005360
005361 gtgggagtta gggatgctga ccgtcccccc aacatgcagt cagaaaactg catgtaactt ttgacttccc caaaaaacca 005440
005441 ttggtggcct actattgact gcaatcctta cccataacat aaagaaacaa ttaacatgta ttttgtatgt tgtatgtatt 005520
005521 atatacatga taaactagag aaaataaatg ttaagaaaac cataagagaa tatatattta cttctcatta agtggaagta 005600
005601 ggtcaccatg aaggtcttca tcctcatctt catgttgagt aggctaagga ggaggaggaa gaagaggagg ggttggtctt 005680
005681 gctgtcttcg gggtggtaga gatggaagaa aatccatgta taagcgcacc catgcatttc aaacccgtgt tgttcaaacg 005760
005761 tcagctgTAT ACAAAAACAT ACGTATTATA TAACTGCAAA TGGGAGTGCT TAGTACTGTC AGTTTTAAAA ACAGAAAACC 005840
005841 TCTAAAGCTC TTACCACGAG CCTTTCTAGC AAGGCAGGGC AGTCTGAGAA AAACTACTCT GAGAAGAGAA CTAACAGTGG 005920
005921 TTATAAAACT GCTTTAAAAT CATTGCCAGA ATGtgaagat actgaaaaag ttttcttgta gatcggagaa ctgataagaa 006000
006001 agaaacataa aagtgtccac atgacatgga gtttctgtag aaggcaaaaa tgaatcatgg tacccattgg tgattgggtg 006080
006081 gtgaagggca ccagaagaga aagcagaaaa tttagggtct taaaacacca ccaccaaaaa aagaataaat caaaggactc 006160
006161 ataccctctc ccaccaccaa aaaaaaagaa gaaagaaaag gaaaggaaat tcagtaaaga aatgggactt tggtgcattg 006240
006241 tcaaaagaag gtaaccctga attaagaatc ttttaagcta atcctaatct acaaaatgaa tggaatgaaa ctagaccatt 006320
006321 ataaacttac tagaagaaaa cagatttgat aacactttag ttgatggtac cctctccccc agaaacaacc ataaaacaga 006400
006401 agaaactgac aacactgtag attgaattag tttgtctgtt cagactacat ctgggagtat agaaaaacac cttgaataag 006480
006481 atactcaaat gttaaaaaca aatggacaga aaaccgggga tggatggaaa gaatacattc aatgcaggaa agaaatagga 006560
006561 agaggaaaat tatatccgta ttgactaaat tacaacatga ctgagggaga atagacttaa atgaaaattt aataaggggc 006640
006641 atagaagaaa ggttgaaaac aactaaggga ataaaaatga gataaatatg aagagagtga gaaaatggtt gagatggaag 006720
006721 gtaggcaagg aggaaataac tgtacatata aatgcaatcc ctagagaaga aaacagtgtg atatagctaa tattaaaaac 006800
006801 tataatcaaa ggaaacttcc cagaaataaa agatctaaat ctacgtattg aaagggtctg ctggataatt tgaaagatta 006880
006881 accccaagca atccacccga agacaagtct tactaaaact gtttcacttt aaacataaag gaaaaaatct ccaagtcctc 006960
006961 taggcacaaa gaccaaacaa cttataagag caaaataatt ttattggcac tagacttgca aagtcaactt aaaacaaggc 007040
007041 ctcaatgcag catttaaaat gactcaatga aaaagtgtga gccaaggatt ttgtaActtt gaccctagca atcccacttc 007120
007121 caggaattta ctctaaatgt gtaccctcca aaattaaaat gcatatgcat acgtttattt attgcagtat tgtttttata 007200
007201 atagtatagt agaaactaaa ttcttatata taaaagagta gttgaacaaa ccatggtata tctgtactct gaagtattat 007280
007281 tctgtattag tgtgtgttct ccagagaaac agccaatagg atatatagat atatatatat atataagatt tattataatg 007360
007361 aattggctcg cagagttatg gaggccaaga agtcccgaat ctgaggttgg caagctgaag acccagagga gctgatggta 007440
007441 tagtttccag tctcagtcca aaggtctgca aaccaggaaa gccaatggtg taatttccag tctgagtcca agtctgaagg 007520
007521 caggaaaaga acagtgtttc agtatgaagc acagggagtc ttctctaccc tcggaggact ttttgttgta ttcaggccac 007600
007601 taattgattg gatggcaccc acccatatta gagagggcca tctctttact cagcctacca attaaaatgt aactctcaac 007680
007681 gagaaaacct ttatagacac actcagaata atatttaacc aaatatcttg gcatcctgtg gcctgttcaa gttgacacat 007760
007761 aaaattaacc attctatttg tagttgtaca atagaatgag gaagatatct gaactgatac ggagtgagtt gcagaatgta 007840
007841 ttgttaaatg atagaaataa agttcaaaac tataggatga tgttaccttt tgtataagaa attaggaaaa aggcaatgtg 007920
007921 tgtgtgtgta tatatatgtg ttcaattgtg cacaaataaa tactggaaag acaaactatt gagattggtg ggtaaaaata 008000
008001 aagatgggtg ggtgaaaatg gagtggaagg gtttgatgta attatttggg tagttctgac tttagaatcg tgttaatgtt 008080
008081 ccacatgccc taaaattaaa tcaatctgta tgaaaggtgc actcaatgga atataacaga aacaactgaa cttaaatgta 008160
008161 ttttaaatga ataacactct ttgaggggat tggcaatgtt aacccaggta acttaagaat gtactatttt gacactatac 008240
008241 tataaggcta aagacaatca taaagaattg taaatactta ggagatttgt tttttacatt gttatgtgag gattagcaat 008320
008321 tttaaatcta ttatatttgt attcttggac tggacaaatt aataaataca ttgtgggtaa
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Predicted Small Protein

Name NONHSAT114079_smProtein_2798:3013
Length 72
Molecular weight 8451.9268
Aromaticity 0.253521126761
Instability index 48.1085915493
Isoelectric point 6.99053955078
Runs 14
Runs residual 0.048628613788
Runs probability 0.0329699447347
Amino acid sequence MVCKYFLPFSRFSLHSVDFFSFALQIFPFYFDIIPFVSFHFHGLCFLGSYPRNHLPDHCH
IAFPLCFLLVL
Secondary structure LEEEEELLLLLLLLLLHHHHHHHHHHLLHHHHEELEEEELLLLEEELLLLLLLLLLLHHH
HHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHH
HHHHHHHHHHH
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooooooooooooTTTTTTT
TTTTTTTTTTT