NONHSAT114110

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT114110

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3898 nt

Genomic location

chr6-:99344608..99395882

Exon number

5

Exons

99344608..99347357,99353302..99353546,99374353..99374936,99375581..99375698,99395682..99395882

Genome context

Sequence
000001 ctcctccccg gctccgcccc gccTCCCCGG GCCCGCCGCT CCTCGCGGCC TCCGCGTCTT CCTTCCGGGT CGCGCTAGGC 000080
000081 CGGGCTTGCG GCGGTTGTGC CGCATCTAGA GAGTCGGGGA GCCGCCCCCG CACCCAGGCC TTCTCGCGCT GCCTGGTCGC 000160
000161 TGGTGAAGCC CGCGGCGCGC GCCTCTCCCG GACCCTGCAG GGTAAAAGAA TGTCACATGT CAGCATTTGT ACCTGAAGTC 000240
000241 AGCATGCAAA GTTCAGGGTA CCTGGATGAA TGCCAACTTT TGCATTTCCC ATGTGTATCC TGTGACCATT CTATCTGGGA 000320
000321 ACATCCTTCA AAGAGTTCAT GCATCTTACT GAGGACACCT GACCTTTTGA AGCTTCATAA TTCACATCTA GATGTCACCG 000400
000401 GTCTTTCCCA TGTTAACAGT TCTGACCATG TTTTATTATA TATGCCTTCG GCGCCGAGCC AGGACAGCTA CAAGAGGAGA 000480
000481 AATGATGAAC ACCCATAGAG CTATAGAATC AAACAGCCAG ACTTCCCCTC TCAATGCAGA GGTAGTCCAG TATGCCAAAG 000560
000561 AAGTAGTGGA TTTCAGTTCC CATTATGGAA GTGAGAATAG TATGTCCTAT ACTATGTGGA ATTTGGCTGG TGTACCAAAT 000640
000641 GTATTCCCAA GTTCTGGTGA CTTTACTCAG ACAGCTGTGT TTCGAACTTA TGGGACATGG TGGGATCAGT GTCCTAGTGC 000720
000721 TTCCTTGCCA TTCAAGAGGA CGCCACCTAA TTTTCAGAGC CAGGACTATG TGGAACTTAC TTTTGAACAA CAGGTGTATC 000800
000801 CTACAGCTGT ACATGTTCTA GAAACCTATC ATCCCGGAGC AGTCATTAGA ATTCTCGCTT GTTCTGCAAA TCCTTATTCC 000880
000881 CCAAATCCAC CAGCTGAAGT AAGCTTATTC AGCTGATTCT GAATCATCTT ACACTACCAG ACCTGTGTAG ATTAGCACAG 000960
000961 ACTTGCAAAC TACTGAGCCA GCATTGCTGT GATCCTCTGC AATACATCCA CCTCAATCTG CAACCATACT GGGCAAAACT 001040
001041 AGATGACACT TCTCTGGAAT TTCTACAGTC TCGCTGCACT CTTGTCCAGT GGCTTAATTT ATCTTGGACT GGCAATAGAG 001120
001121 GCTTCATCTC TGTTGCAGGA TTTAGCAGGT TTCTGAAGGT TTGTGGATCC GAATTAGTAC GCCTTGAATT GTCTTGCAGC 001200
001201 CACTTTCTTA ATGAAACTTG CTTAGAAGTT ATTTCTGAGA TGTGTCCAAA TCTACAGGCC TTAAATCTCT CCTCCTGTGA 001280
001281 TAAGCTACCA CCTCAAGCTT TCAACCACAT TGCCAAGTTA TGCAGCCTTA AACGACTTGT TCTCTATCGA ACAAAAGTAG 001360
001361 AGGTGAGAGT AATTCATAAT TTTCATCATT GCTATTATGG TAGCCAACTG AAGATTTGGT TTTCTGTAAT TGCTCATAAT 001440
001441 AATGTGTTTT TTATTTTTAA ATCAAGTTTA TGATGCCTTC TGACTACTCT GAAATCAATA GAGCTGATTC AGTCATTGTG 001520
001521 AAGTTATTTC AAACCTAATA TGCTTTTAAA TTATAAGGAA ATGTTCTTCT CTATGCTCTT AAAATTTTTG TGATGCTATT 001600
001601 TATGTCCCCA GGAAAAAAAA TAAGCGTTGG TTGAGGTAAG CCAAAATGCT GGCAGGGAAT GAATTAGAGA AAGGTAGGAG 001680
001681 GATAATATGT AAGAGGACAT TTGCTTGCAG TGGGAGGAAG CAAAGTGATA TTTATCCTGG ACCAGACTTG GGGGTTAAAA 001760
001761 TTTGTAATAC CATAGTTAAT GAGTCTCATT TAaaaaggaa tcatgtcata tatattagtc tacttgcttt ttcactaata 001840
001841 tctctaggac atgtttccag ggtcagtgca tatattatct aactctttta ctgtaatagt gtatgttata ccataatcta 001920
001921 tttaacattc tccaaatgat caacatttag tttttccagt tgttttcctt ttacaaacta cctagcacta acattcttct 002000
002001 gtgcatagtt ttttttttct tttttgagac ggagtctcac tctgttgccc aggctggagt gcaatggcat ggtctcagct 002080
002081 cactgaaacc tccgcctgac cagttcaagc gattctcctg cctcagcctc ctgagtatct gggattacag gcacgtgcca 002160
002161 ccatgcccag ctaatttttg tatttttagt agagacgggg tttcaccatg agcctgtgca tggttttaca catacttact 002240
002241 attactgctg ttggatagag tcctagaggt ggtattgcta ggttaaagag tatgtacctg ggcccctgta gtacatactg 002320
002321 TTTGTCATAT Actttttccc tctgctgcat gcatattggc cttctttcta ttccttgaat gttctgacct ggtcccagct 002400
002401 cagggctttt gtttttttgc ctgtctggaa tgtttgtcta gctcattatg gctgcccttt tttcagctca gtgttcaact 002480
002481 tgcatatttt tttagagatg gcttcctgga tactgtagca ccccttctag tttgtttcct tcatatcatc aagtttcatt 002560
002561 tcctttttaa catccttgtc actctctgaa atgatacttg ttttcttgct tattttctgt cttctcacat taggatataa 002640
002641 tggtagaagc cttgttggtc tttttcattg ccatatttcc agaatctaga atagtacttg gtaaagattg gccattcagt 002720
002721 aaatatttgt taagtaaatg aatAAAGATA ACCAAATTAC TTTTCCAAAA TGATATACCA GTGActtggg agactggatt 002800
002801 agttctggtg ggaatggttt ggttcccaag agagcaggtg gttgtaaagc aaggatgcct tttgtgtttg gcctctttgt 002880
002881 actgtctgcc tcccctttga tcttctgcca tgttaagaca cagcaggaaa gcccttacca gaagccgagc agatgacagt 002960
002961 gccatgcccc ttgaaattcc cagcctccat acctgtgagc taaataaact ctttttcttt atcagctacc caccctcagg 003040
003041 tattttgtta tagcaacacc gaatgaatta agaTGGCATT ATTCTCAATT TTGGGCAAAA TATTTAGCTA GGCTTCAACA 003120
003121 GGTGACCTGg cagggtggaa agaagacttt gattctagtt ctagccctgc cagcaataag cttggtaatc taggtgaaga 003200
003201 cattgtctca gatttccaga ttttttattt gtaaaatgaa ataattattg tccctgAATG CCAGATGATA TTAGCCTGTG 003280
003281 TTTTCATTGG TCTGTGGTGA AATGACTCCC CATTTGTGTG GGTATAAAAT TGCTAGCTAT CTTTTCTTGG GTAGGACTGT 003360
003361 TCATTCTGAA ATTATGCCAT ACCTGCTTTT TACTGGCACA TTTACTATTT TATGGGCCTA AGTACTATAA ACGAAATCCT 003440
003441 CTGAGCAAGG AGGATTTAAA TGCCTCATTT AAAATTTTCT GATTGTTTAA TAAGAAATAT AGCAGGCATA ATTATTAAAT 003520
003521 GTAGTTATTA AATGAGCCTT TGAGAAGAAA AATAGGGTAA AAACCAAAAA AATATTAACT TGCTAGGCAT CTTATATCTA 003600
003601 TTGTGGCTTG TGAAAATATA TCCCATGAGA TGTTTTTGAA ATGTTGTATA GTAATGTGAT CTAAGTGTCA GAGAATTATT 003680
003681 AGTCTACAGT TTTCTTAAAT TTGTTTCAGA CTGATAGATA TGACCAAATT TTTTAAGTGT GATTTATGAG GATTAAGAAG 003760
003761 ATTTCATATC TGAAGAGTGG AAATTTATAC ATATGTACCT AGGTCTAGAT AGCATAAGCT CTGGTTTCCC TCAGTTACTT 003840
003841 AAATACAGAT GTAAAATCAT TGTATGAATA TATTAAATAA AATTTAGGTT GTACCCTC
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Predicted Small Protein

Name NONHSAT114110_smProtein_584:820
Length 79
Molecular weight 9195.1721
Aromaticity 0.102564102564
Instability index 44.1974358974
Isoelectric point 9.34576416016
Runs 12
Runs residual 0.0201688555347
Runs probability 0.0353073661897
Amino acid sequence MEVRIVCPILCGIWLVYQMYSQVLVTLLRQLCFELMGHGGISVLVLPCHSRGRHLIFRAR
TMWNLLLNNRCILQLYMF
Secondary structure LEEEEEELLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEELLLLLLLEEEHHHH
HHHHHHHHLLHHHHHHLL
PRMN LLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLLLLLLLLLLLLLLL
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