NONHSAT114125
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114125 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2011 nt |
Genomic location |
chr6+:99968870..99981058 |
Exon number |
5 |
Exons |
99968870..99969023,99969591..99969676,99973940..99973985,99979239..99979412,99979508..99981058 |
Genome context |
|
Sequence |
000001 GGAGCAGGGC GCCAGGAGGC CGGAGCAGGA GGAGAAGGAG TAGGAGGAAG TGGTCACTAG CGCGGCGGCC GCCGGCCCGC 000080
000081 AATGGTGCTA CCCTGGTTGC TGCTCGAGAC TGCGCGCAGG GCGGTCCTCG GGTCCGCGGA GGCTGCGCTC TGCGCACCAA 000160 000161 CTTTTATCTG TGGATGCAGC TACAGGGACC CAGCATTAAC ACAGCTTACC CCCAGCCCCA CCTACCTATT TTAACTGTTG 000240 000241 CCATGAAAAT GACAGATGAA AATAGAAAAG TGTGGCTGGT CTGAAGGTTT GACGTCAATA AAGGGAAACT GCCACAATTT 000320 000321 TTATACTGCT ATTTCTAAAG ATGTCACTTA TAAGGAACTT AAAAACCTGT TGAATTCTAA AAATATTATG TTAATTGATG 000400 000401 TTAGAGAGAT ATGGGAAATT CTGGAGTATC AAAAAATCCC TGAGTCTATC AATGTACCAT TGGATGAAGT AGGTGAAGCT 000480 000481 CTACAGATGA ATCCAAGAGA CTTCAAAGAG AAGTACAATG AAGTAAAACC ATCCAAATCT GACAGCTAGT GTTTTCTTAT 000560 000561 TTAGCCGGAG TGAGAAGCAA GAAGGCCCTG GACACAGCAA TATCTCTGGG CTTTCACAGG TGTGTAGATG AATGAAAAAA 000640 000641 TGGATTGATA AATGTATAAT CCAATGTTTC ATATATATTA CATTTTTATA TGTCTATTTA AGAATTTCTT GTAATTACTG 000720 000721 TCAGTAAAGG CAGGATAGCA AAACTAAGAG CCTCTTTTCA TCTTACTCAA TTTAGAGATA ATAGCGGCCA GGCGTGGTGG 000800 000801 CTCACGCCTG TAATCCCAGC ACTTTGGGAG GCCGAGGCAG GTGGATCACG AGGTCAGGAG ATCAAGACCA CCCTGGCCAA 000880 000881 CATGGTGAAA CCCTGTCACT ACTAAAAATA CAAAAATTAG CTGGGCATGG TGGCACACTC CTGTAGTCCC AGCTACTTGG 000960 000961 AAGGCTAAGG CAGGAGAATC GCTTGAACCT GGGAAGCGGA GGTTGCAGTG AGCCGAGATC GCACCACTGC ACTCCGATCT 001040 001041 GGCAACAGAG TGAGACTCCA TCTCAAAAAA AAAATGTTTA TAGCACTATT TGATGTATGT TTTCAGTGCT TAACACTATG 001120 001121 CCAGAGGATG GAAAGAATGG GTAACCTGTG AATTTTCAGA GAAGAAACAA GGAAATTGAA TTTTTGGAAT ACAAGTTGGC 001200 001201 TCTTTCCTTG TGTACATGCA GCCTAGGATA GTGGAATGAG CAAAATATTA AAAATCTAGT CCTGGCACCA CTGGTTATGG 001280 001281 TAAGGGGATT TTTGTATAAG TCAATTAGTT GTTGAATCAT TTTCTCATCT GTAAATTGAA AATGGCACTC TCCCCTGAGA 001360 001361 TAATGCATGT TACTTGCCAT GGAAATATAA GGGTCAGGAT TCTATGAATT AATTTTTAAG TAGCTTAGTA TCATTCAATA 001440 001441 GTATTCTAAA ATACCAGGTT ACTTATACTA CCTACTCATG TATGACATTT GTGTTAGTAT ACCTTCTATT CATCAAAGGG 001520 001521 GCTATGAGCT AGACCTGCAG ATTAACACGC AGATGTGGCC TTAAAAAAAA ATCAGTTAAT CTGGGATCCA GAGAAGTAGG 001600 001601 TGAAATTTGA ACAATGAAAA TACATTAACA GCTTCTAAAG ATTTATAGCA GTATTATGAC CAGCATGGTA GTGATGAAAT 001680 001681 TTGCAATTTA AAAAATTAAA ATTGGGCCAG TTGTGGTGGC TCATGCCTAT AATCCCAGCA CTTTGGGAGG CCGAGGAGGG 001760 001761 TGGATCATGA GGTCAGGAGA TCAAGACCAT CCTGGCCAAC ATGGTGAAAC CACCCCCCGT CTCTACTAAA ATACAAAAAA 001840 001841 TCAGCCAGGC ATGGTGGCGG GTGCCTGTAG TCCCAGCTAC TCGGGAGGCT GAAGCAGGAG AATCATTTGA ATCCGGGAGG 001920 001921 CGGAGGTTGC AGTGAGCCAA GATTGCATTA CTGCACTCCA GCCTGGTGAC AGTGTGAGAC TCCGTCTCAC ACACACACAC 002000 002001 ACACACACAC A |
Predicted Small Protein
Name | NONHSAT114125_smProtein_173:283 |
Length | 37 |
Molecular weight | 4121.8457 |
Aromaticity | 0.0555555555556 |
Instability index | 53.8277777778 |
Isoelectric point | 8.27508544922 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.0406288641584 |
Amino acid sequence | MQLQGPSINTAYPQPHLPILTVAMKMTDENRKVWLV |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |