NONHSAT114280
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114280 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
570 nt |
Genomic location |
chr6-:107301658..107342042 |
Exon number |
3 |
Exons |
107301658..107301856,107304202..107304356,107341827..107342042 |
Genome context |
|
Sequence |
000001 TTGCCCAGGC TAGTCGAACT CCTGGGCTCA AGTCATCTGC CCACCTCTGC CTTCCAAGGT GCTGGGATTA CAGGCATGAG 000080
000081 GCACTGCGCC AGCCTTCAAC CATGTTTTCA TTTCTTTATT TTTGAGACAT GGTCTCCATC TGTTGCCCAG GCTAGAGTGC 000160 000161 AGTGATGCAA TCATGGCTCA CTGCAGCCTC TACCTTCTGG GCACAATTGA TCCTCCGAAT GAATGACCTT TGGGTCACAG 000240 000241 GTCCACCGGC GACTCACCAG GGGTTTGTGC CCCTTCCTTC TTTCCTTCTC AGTGGAGTTT GAAGCACTTA CGGGTGTCAA 000320 000321 GGAAGCAAGT CTTATCGCCC CTTTCCACCT TCTATGAGTT TTCTTTGGCC ATATTAGTTG TTAGGCCATA GAATATAAAT 000400 000401 GCTAAGAGTG TGGGCTCTAG ACAGCCCAGA TTCAAATCCC TGCTCTGCCT CTTACTAGAT GTGCAACCTC AGGCAAACTT 000480 000481 CGTAAACTCC CTGTGCCTCA GTATCTCCAT CTATGCAATG GAGATAATGC AAGCCCTAGC TTCATAAAAC CGTTGTGCAG 000560 000561 ATTAAAAGAT |
Predicted Small Protein
Name | NONHSAT114280_smProtein_164:301 |
Length | 46 |
Molecular weight | 4986.7659 |
Aromaticity | 0.133333333333 |
Instability index | 49.5733333333 |
Isoelectric point | 6.49566650391 |
Runs | 9 |
Runs residual | 0.0377525252525 |
Runs probability | 0.0221299731103 |
Amino acid sequence | MQSWLTAASTFWAQLILRMNDLWVTGPPATHQGFVPLPSFLLSGV |
Secondary structure | LLLHHHHHHHHHHHHHHHHLLLEELLLLLLLLLEELLLHHHHLLL |
PRMN | - |
PiMo | - |