NONHSAT114328

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT114328

Source

NONCODE4.0

Same with

,

Classification

sense

Length

411 nt

Genomic location

chr6-:108365937..108370872

Exon number

3

Exons

108365937..108366044,108370457..108370622,108370736..108370872

Genome context

Sequence
000001 AGAATACTTT GGTCAGTATT ATGGACTTAG AATATGAAAT TTCTGTATGG ATATAAATTT CTACAATGAC TGTATTTTGA 000080
000081 ACCAGGTTTT TTTCCTGGCA GAAGAAGTTG TCCTCAACTA TCAGTAGGTT TTTAGAGATG AACATCACTC GAAAACTATG 000160
000161 GAGTCGAACT TTCAACTGTT CAGTCCCTTG CAGTGACACA GTGCCTGTAA TTGCTGTTTC TGTGTTCATT CTCTTTCTAC 000240
000241 CTGTTGTCTT CTACCTTAGT AGCTTTCTTC ACTCAGAGCA AAAGAAACGC AAACTCATTC TGCCCAAACG TCTCAAGTCC 000320
000321 AGTACCAGTT TTGCAAATAT TCAGGAAAAT TCAAACTGAG ACCTACAAAA TGGAGAATTG ACATATCACG TGAATGAATG 000400
000401 GTGGAAGACA C
[back to top]

Predicted Small Protein

Name NONHSAT114328_smProtein_137:358
Length 74
Molecular weight 8376.774
Aromaticity 0.109589041096
Instability index 70.1946575342
Isoelectric point 10.1450805664
Runs 14
Runs residual 0.0476358815731
Runs probability 0.030578898226
Amino acid sequence MNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQKKRKLILPKRLK
SSTSFANIQENSN
Secondary structure LLLHHHHHHLLLLLLLLLLLLEEEEEEEEEEEEELEEEEEELLLLLHHHLLEEELLLLLL
LLLLHHHHEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLL
PiMo ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiii