NONHSAT114328
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114328 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
411 nt |
Genomic location |
chr6-:108365937..108370872 |
Exon number |
3 |
Exons |
108365937..108366044,108370457..108370622,108370736..108370872 |
Genome context |
|
Sequence |
000001 AGAATACTTT GGTCAGTATT ATGGACTTAG AATATGAAAT TTCTGTATGG ATATAAATTT CTACAATGAC TGTATTTTGA 000080
000081 ACCAGGTTTT TTTCCTGGCA GAAGAAGTTG TCCTCAACTA TCAGTAGGTT TTTAGAGATG AACATCACTC GAAAACTATG 000160 000161 GAGTCGAACT TTCAACTGTT CAGTCCCTTG CAGTGACACA GTGCCTGTAA TTGCTGTTTC TGTGTTCATT CTCTTTCTAC 000240 000241 CTGTTGTCTT CTACCTTAGT AGCTTTCTTC ACTCAGAGCA AAAGAAACGC AAACTCATTC TGCCCAAACG TCTCAAGTCC 000320 000321 AGTACCAGTT TTGCAAATAT TCAGGAAAAT TCAAACTGAG ACCTACAAAA TGGAGAATTG ACATATCACG TGAATGAATG 000400 000401 GTGGAAGACA C |
Predicted Small Protein
Name | NONHSAT114328_smProtein_137:358 |
Length | 74 |
Molecular weight | 8376.774 |
Aromaticity | 0.109589041096 |
Instability index | 70.1946575342 |
Isoelectric point | 10.1450805664 |
Runs | 14 |
Runs residual | 0.0476358815731 |
Runs probability | 0.030578898226 |
Amino acid sequence | MNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQKKRKLILPKRLK SSTSFANIQENSN |
Secondary structure | LLLHHHHHHLLLLLLLLLLLLEEEEEEEEEEEEELEEEEEELLLLLHHHLLEEELLLLLL LLLLHHHHEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiii |