NONHSAT114483
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114483 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
824 nt |
Genomic location |
chr6+:111897521..111919711 |
Exon number |
2 |
Exons |
111897521..111897673,111919041..111919711 |
Genome context |
|
Sequence |
000001 GTTGCTACCA TATTAGATAG CATCTTTATT ATTTTCGTTG CCAGTATTCC CACGAGCATT CTGCTGAGAT GAAcaatcag 000080
000081 atgacctcgt gtgagatttg gaggagagaa ggaaatggag agcatgcgtc tgccgcttct gtggtttctg tcgGCTTTCT 000160 000161 CCATATTTAC GTGCTTGTAA CTCTGGCATG ACCTTTGCTC CAGTCTCTAC CAGAGGGCGG TGCCTGGATT GAAGTGGAAA 000240 000241 AGCCCTGTTT TCCAGCCATG ACCCAGGGAG CAAGCACTGA CTCCTCAGGG GAACAGGAGA CCTGCCAACT AGGACCCTGG 000320 000321 GAGCCCCCAT GCTGGCAGTG CCCTGGGTCA TCTCAGGCTC ATCAGCAAAT CCTGGGGGGA GAGCGGGGCT GGAGGGCGAA 000400 000401 GAAGCCCAGG AGAGTTCCTG GCTCAGAACC CCTCTCTGAG GCTCCCAATA CAGAGCCCAG GCCCCACACC CAGGGCCTCT 000480 000481 GAGTATTTTT GTTTATTGTA TGTAAAATAC TAGTGTATTT TTGTTTAAGT CTCACAggta aacaggttct ctcatacttt 000560 000561 gccaagggaa atgtgatctg tgcaatttgg caataactat cagaatttta aaagcttatg ccctttgacc tagtaatttc 000640 000641 acttctaaga atttcccctg cagagatatg tatatcttgt atgaaatgaa gaggctacga agacaggcaa cgccgcagtg 000720 000721 tttataatag cgaagaccag acacaaccca catgtctaaa ggttctgatt tttaaaactg tagtatatct gtacaatgag 000800 000801 cactccacat cctttaagaa tgag |
Predicted Small Protein
Name | NONHSAT114483_smProtein_257:481 |
Length | 75 |
Molecular weight | 8035.7479 |
Aromaticity | 0.0405405405405 |
Instability index | 57.0162162162 |
Isoelectric point | 6.04986572266 |
Runs | 7 |
Runs residual | 0.0480553724456 |
Runs probability | 0.0245918187095 |
Amino acid sequence | MTQGASTDSSGEQETCQLGPWEPPCWQCPGSSQAHQQILGGERGWRAKKPRRVPGSEPLS EAPNTEPRPHTQGL |
Secondary structure | LLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLHHHHHHLLLLLLEELLLLLLLLLLLLLL LLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |