NONHSAT114818
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114818 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1780 nt |
Genomic location |
chr6-:126420061..126439869 |
Exon number |
7 |
Exons |
126420061..126420590,126424038..126424488,126427792..126428071,126436323..126436356,126436531..126436838,126439638..126439741,126439797..126439869 |
Genome context |
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Sequence |
000001 AACTCTCCTT GATAAATCAG AAGAAAATAA GAAACAATGT CAGAAAAAAA TCCATTCAAG CCGAATGTAA TTGTAAATTC 000080
000081 TTCCATCTCC CTAGGAATCA ATGCTCATTT TCCAGACAAT ATCACTTCAT CAGACTTTTA TCCCAAAACT GCCAGACAGA 000160 000161 AACATTGGTA ACCATAGTTT TGAAATAGAG ACAATAGCTT AATAACCACA CAGGTGATAA GTTGAGCAAT GTTCTAATGT 000240 000241 TTCTTCTTCT TGAGTAACAT GTACATTTTA ATTGCTTTAC TTCTGATTAA ATAGCAATAT AAATATTTTC AGACTTGGGC 000320 000321 AGGGATACTA AGGACTAGAA AAGAAATGAA CATATTTTGA GGGCTAAGGA AATTACCTAA ACTTCAAATA TCAGGTGACT 000400 000401 GAATTTTCCT CTAAGCAATA GCATTCAATC TTCACTGCAC ATTGGAATCA TCTGAGAAGC CTAAAAACTA CAAATACCTT 000480 000481 TGTCCAAGTA TAGGGGAGGA AGCCCTCTGC CTTGAAGGCG TCACTCTCTG TTACGCATGC TGGAGTGCAG TGGCCAGAAT 000560 000561 CTGAATTTTA ATGCAAAAGT AAAAACTGTG GCAATTACTG ATGTATACAC CAATACTCCT AATAATAATT AAATTCAAGT 000640 000641 CATAGGTAAC ATGTATTGAA TACTTAATAT ATGCCAGCCC TGGGCTAAGC TCTTTATATG GATAGCTGCT TTGAGTCCTC 000720 000721 ACTTCTACCC TAAGAAATAA GTATAATTAT TATCCCCCAT TCTACAGAGA AGTAAAGTAG AGCTTAGCAG GAGGAAAATG 000800 000801 TGCATTGTGG TGAATAGTAT AAAAGACTCA CTTTTAATCC TTTAGACACA GCCAGAAACA AGAAGGAGTT TACAATCTGG 000880 000881 ATGGAAAGAT TAAACAAAAT TAAACAATAT CATATGACAA ATGAGAATTA GCGTAGGACC ATTTATGATC AATTGCCAAA 000960 000961 TACATGAGGC AGGCATAAAT TCTCCAAGTA TGCTGTGGGA AGAGAAGTCA CTGGGTCCCA GGAAGAGTTT ACGATGGAAG 001040 001041 TCGAGGAGGT TCCACAGTTC TTGCAGGATA AATAGAGCCT GCTTTGGCAG AGATGAGGAG TAACACATTT GAGACAGGAA 001120 001121 ATAGAAAACA ACACACTCTG ATCTCTGTAG AAATGAAAAT GCCATTCTCT ATGGGATGAA CAATTATATA AGACAACAAT 001200 001201 TATATGACTT TGGCAAATTA TTTTCTCTCT CTAAACCTCA GTTCCCTCTG ACGGAAAGTC AATTACCTAA AGCCCATTAG 001280 001281 TTATCACAGC AGGTCACAGG TAGGTGGCCA AATTTTGATT GATGCACTAA ATTTATTTTC ATTTTAATAC AGGATATGTA 001360 001361 GAGCAAAACC ATTACCCAGA GTCTTGCTGA GCAAGTAGAG AATGTGTAAG TGAAAGCAAA GATGTGCGGT ATTAACACCA 001440 001441 CACCAAAGTG CACAGATTTA CTGAAATCTG GGGAAAATTT TCTCCCCTGA ATTCAAAATA CAGCACGTTT GAAGAAGTAT 001520 001521 ACAATTCTAT ATAAATGCAA TATATTCCTG AAGGACAACC AAATGATAAG AAGCTAACAA TGAATAATTT AAGAATGCCA 001600 001601 CCAAGCTTCT AGCAATGAGA AGTAACTTCC AAAAGTGGGA GGCTGAGAAG CAACTCCTAG GTAGATTTAA TCCTATGTGA 001680 001681 CAGCTACCTA ATTATGTACC TACCAACTGT GAATGACACG TAGCCAGTTC TCAATACATA TTTGTGGAGT TAATGGATCT 001760 001761 TGTTGAATGC CTACATTTTC |
Predicted Small Protein
Name | NONHSAT114818_smProtein_920:1102 |
Length | 61 |
Molecular weight | 7037.0655 |
Aromaticity | 0.0833333333333 |
Instability index | 74.8466666667 |
Isoelectric point | 9.87872314453 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0196863530197 |
Amino acid sequence | MRISVGPFMINCQIHEAGINSPSMLWEEKSLGPRKSLRWKSRRFHSSCRINRACFGRDEE |
Secondary structure | LEEEELLEEEELLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLEELLLLL |
PRMN | - |
PiMo | - |