NONHSAT114849
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114849 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1299 nt |
Genomic location |
chr6+:127664756..127666054 |
Exon number |
1 |
Exons |
127664756..127666054 |
Genome context |
|
Sequence |
000001 AGGGAGCCAG GGTGGGCGGT CTCCTATTGT ACTTGGCTTT TGAATTTTCG CTTTTGCAGC ACAAAGGTAG GGCTGGGAAA 000080
000081 GGAGGCTGCC GAACCGTGCT TGTTTTCGCT CAGATAAACG TGAGAAAAAG TGGAGGTGAG GAAGCCAGTG TAGGCAAATA 000160 000161 GCGAGAGGGG AGAAGACAGA AAGGTACCGA AGGTCGACCT TTTTTAGGTA TCTTATCCAA GTTATTGAGG GGAATGGGTA 000240 000241 TTTAGCCAGT TTTTTGTTTG TTTGTTTTTA TCCGAATATC CAGTGTGTGT CTTGAATGTG TGAATGTGAC GTGTTTATAA 000320 000321 AGCTCAGTAA GCTTAAAATT CCGTGCCAAT ACATTTTGTA TGCCGCAGAC AGGAAGTGCT TTGGAAGACC CTTGAAAGGG 000400 000401 GAGGTGATTT TACACCAATA TTGAGATCAT TTTGTCAGAG TCGTGGGACT AAAGGTAGAC CTTAGGTAGT CGAtgtcaaa 000480 000481 gataagcgca gctggacgtt aaagcggtga aaacattcag ttaactactg acaggaaaga gctgagctct atttcgattc 000560 000561 gtgcagagat catctgggca tttttaaagg gacgttttaa aaggagaaag gggatatgcg ggcgctcagt agagaaagtg 000640 000641 aacctacaga gttgttagtg taaatgtgat taggccagct gtgtgtttgt gtgtgcgcgc gttttaacag ttaccgcagg 000720 000721 attctatcct cctacggagg attttatcct tctcgattac atttcaaagg aatgactctc tggtccttga gagagaactt 000800 000801 ctgagtggca agaaataagt ctttacaatt gcaagccctt tagtaaacgt tctaagaaag ggatgtcaga gacctatcat 000880 000881 cagttgtgtg ctggttacat cacgtagtta agctttctga ggcagtcgcc ctgggcacag ggccttatgc tgctaaagct 000960 000961 tgctagagtt tggtcaagtc tctgaacgca ggggtttaga tgggatggtc atgttcctgg agttctgcag tGGTCATAGG 001040 001041 TATGATTTGA ATAAGTACAG GGAATATTCT AGTCGGAGGA ACAGAATGTG CCAACGCGCC GAACAGGGAG GATAGTTTTA 001120 001121 CGATACGGAG ATGTGTATGA TAGGGAATAA GTGGGAGCCC AGTTTGGACT AATTGGAAGA AGTCATTATT AGAAGTACTG 001200 001201 TATTTAATTC TAGTTTGTTA TAAAATGAga ctccaagatc actgagccat ttcactgaga ctccaagatc accccaatgc 001280 001281 taggctaatc tccatggcg |
Predicted Small Protein
Name | NONHSAT114849_smProtein_1004:1114 |
Length | 37 |
Molecular weight | 4419.985 |
Aromaticity | 0.138888888889 |
Instability index | 52.8083333333 |
Isoelectric point | 9.29827880859 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.0465818759936 |
Amino acid sequence | MVMFLEFCSGHRYDLNKYREYSSRRNRMCQRAEQGG |
Secondary structure | LEEEEEELLLLLLLHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |