NONHSAT114882

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT114882

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2673 nt

Genomic location

chr6-:129800758..129873731

Exon number

22

Exons

129800758..129801000,129802406..129802555,129802647..129802783,129802928..129803046,129803532..129803639,129804752..129804809,129806379..129806463,129807537..129807717,129815213..129815437,129820605..129820735,129823750..129823936,129843622..129843752,129844314..129844381,129845112..129845209,129847768..129847930,129849810..129849883,129854061..129854114,129860321..129860520,129861592..129861687,129867540..129867637,129867768..129867773,129873687..129873731

Genome context

Sequence
000001 GGTTACCACT GGAGGGGTTT GAGCAGAGCC ATGGCATATA CTGATCTACG TTGGAAGCAG AAAAACTGCC AGGAAAATGT 000080
000081 CACAGCCACC CCTTACTGAA CAGCAGAAAC ACCAGCAAAA CACCAACTGC AACATGGTGT ATTTTGAAGG TGAGATTAAA 000160
000161 TTTACCTACA CCTAGAGAAA TAATTGGAGC ACATGTCTAT TTGGGCCAAG AGGATAAAGG CCAGTAGAGG AATCAGATCA 000240
000241 AAGAACTTCC TCAGGGAAGT GTGCAGAGAA CTGGAGTGGA CCTTCCCCTA GGAAGCTGCC CAAAACGAGA GTGCTGGAAA 000320
000321 GCTGGCCGCA GTGAGGCACT TCAGATCCCA AGGGTATGCT GGGGAAGCTG CCACAGGTGG GAGCACTTGC TGCTGGACCC 000400
000401 TAGGCACTGT TGAAACAACT GCACCATCTG CAGGAGCCCA GCAAGGTGCC TTCAGCCATG ATTATAAGTT TCCTGAGGCC 000480
000481 TCCCCAGCCA TAAGAAACTC CAAAGCCAGG CATCCCATCT GGAGAGAGAG AAGACTGAAG CAGAAACACG ATGGGAAGGA 000560
000561 AGCAAAGATG GAGAGACGAG TTTTTGGATT CAACTGAAGC CCTTGCTATC TGCTAGAGTC AGAGTCATCA CAATTGGGGG 000640
000641 GTCTTCATTA AGCTACACTT TTTAATGGAA CATCCTAGTG AGGTTTGAGA GTACAGCTTG ATGGTCTATA TTACATTACT 000720
000721 AAGCCGATTT TATTGGAAAG AACTTGTTTG CATCCCTGCT AGACAAAAAC CTACAAGTTA ACCTTTGCCC GTATGGAGTT 000800
000801 GTAAAACAGA CCAGTTGATA GAAAGAGAAG CCTGCTTCCC GAAGCCCTCA GCAGAAGCCG AGCAGATGTT GGCACCATGC 000880
000881 TTCTTGTACA GCCTGCAGAA CTTGAAGAAA CACTCCATAT TAGTTTTCTG GAGCCATCGT TATGAAGCAA CACAGACTGG 000960
000961 GTGGCATAAA CAATGGAGAT TTATTTTTTC ACAATTCCGG AGGCTAGAAG TATGAGATCA AGGTGTTGGA AAGTGTCTCA 001040
001041 GGATGATACA TACCGGTTTT TAACTTTGGT GTCATCAAAT GCAATTGCAA TGTGACTGTT TCTTGAAAGC CCGAACTGCT 001120
001121 TGCTCCCTAT CAAAAGAGCT GGTTCTGATT CTGCAGCACA AGGACCCTGT AAAATACCCA GGAGAGAAAA ACAGGAGATT 001200
001201 ATGGACTGTT CTTTAAAAAG CATTTTAAAG GGGGAACAAG TGAGATGGAA TAGAAACTGC CCTGTGCTTT GCTCAGAAAT 001280
001281 AAAATGATCT TGTCACTAAG GATGATGTTT TCAACTCTGC TTGCCACTGA AATCTAAGCT AAGAAAAAAG GTGCAAGGAG 001360
001361 CACATTGCTC AACCAATTCC ATCGTGGACA CTAAGGAAGA GAATGAGATA TTCAAGAGTT TTCAAGATCT GCACTCAAGA 001440
001441 CAACATTGCC CACCCATTAC TGGTATGGAA TATAACCACA ACACATGAGC TGTAAAGAGT GTAGTGACTG TGACCATCTT 001520
001521 TGTTGTATTG GTGATAAGAA TGTAAATTGG CATAGCCTGT GGAAGAAACA ATTCAGATTC GGCTCTGGTC TGATGACAAT 001600
001601 TTTCCTCATT GTTCGTGCCC CTGTGGAGAG ATGCACTTCC AGACGGCCCC TGTTGAGGAG TATTACATAA TAGGCCTGCA 001680
001681 ACAGCAAGTG GTTATTGAAG ATTAAACAGA AGTCTCATTT ATGGCTTAGC TTTAGAGATT CCCTGGCAGA ACCACAGGAA 001760
001761 TCTGTTTTAT TTTAAGCACT ATCCTGAAAG CTGGTGATTC ACATTCATTT CTTTTATCTT GAAGAGGAGA AATTTGGAGC 001840
001841 CAGAATTTCA TCTTTGATAT AAATTTTAGA ATAAGCTGTC ATGATTCACA GAAAAATAAG ACAAAATAAT TCCTATGAAC 001920
001921 CCTTTCATTG AGAAAAACTA GATTAAATGG AAAATTACGT TTTAAAAAAT GTGATTGAAG ATATTAAAGA ATACCAAGGC 002000
002001 AATAAGAGAG AGGATGGGAT GAGTCAGGCC CAAAAGACTA TTACTTCAGC TTGTGCAACT GGGAAAATGA TCTTAGAGGA 002080
002081 ATTCACATTT AAATTTAAGG GACCGAAGCT GACTGTCTAC AGATTTGGAA CATCCTAGAG AAGACAATTG TCCTGGGGAG 002160
002161 ATGATGTGAG TGAAATAGGA GGCCAGCATG GAAATATGGA ATGTTCAGTC CTTGCTAGCC AAGATGAGAG CAGAAATAAA 002240
002241 TGATACGAAA CTAAAAATAC AAAAGTGGTG CTGGTGTCCC TCCACTTCCC AAAAGAATGA TGCCGGACTC ATTCTTGGTG 002320
002321 CTGAATGACA GGTTGATTTC TGTTCCTACA TCAATTGGCA CAGGGGAGAG CTCCACAAAA CCAGGCTTAG GAAAGCTAAC 002400
002401 TGTGTAAACA TTCTAGTGGG TGTCTATGGC CAATTCCAAA TTGGAGCCTG TAGCTATGAA CAATGAAGAT CCTGAAAGTT 002480
002481 CTGTTCCAGT CTTTAAACCT CATCATTCAA GTGGTGGATT TACTTTTTTC TTTACCCACA TTTTCCCTTC ATTTCCCTAA 002560
002561 TTCTATTGGA GTGGTTTAAG ATAATTTTGA TTAGAAGCAG CAGACAAAAT GAATAATTGT ATTATGATAG GATAATTAAA 002640
002641 AATGTATGAG AATGACAAAA AAAAAAAAAA AAC
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Predicted Small Protein

Name NONHSAT114882_smProtein_1946:2137
Length 64
Molecular weight 7215.2219
Aromaticity 0.111111111111
Instability index 44.8015873016
Isoelectric point 8.78729248047
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0358995358996
Amino acid sequence MENYVLKNVIEDIKEYQGNKREDGMSQAQKTITSACATGKMILEEFTFKFKGPKLTVYRF
GTS
Secondary structure LLLLHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHLLLEEHHHHHEEELLLLEEEEEE
LLL
PRMN -
PiMo -