NONHSAT114910
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114910 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
572 nt |
Genomic location |
chr6-:131191217..131199765 |
Exon number |
2 |
Exons |
131191217..131191266,131199244..131199765 |
Genome context |
|
Sequence |
000001 AAGTCATAGT CTGAGTTTCA AATCCAGGTA CTGGAAGGAA GTGTTATTAG CCATTTTGAT GATCAGTTCC ATGTCATCTT 000080
000081 TCTGATAATG TAAATAATTA TTCCTTTAAA AATCCTAAAT AGAGAAGAAA TCAGAACCCT TTAAAATGTA AATCATTGAA 000160 000161 GAAGTACGCA TTGACTTTAT TTTCAAATTT TGATGAATTC ATGAACTTAC TCATAGATAA TAATATGGCT TTAGAGACTT 000240 000241 GGCATTTTTC TTGCTTTACT ATGGTTTTTT TTTTAATCGT AAGTTTGCTT TGTCTTATTT TTTGGTTTTA TTTTTGTCCT 000320 000321 ACTGGGTTTT TTCCTTTTGG ATTTTTCCCC CCTTTGTTAC GTTACATATT GCTAGGAACT GGATAAGGCC CAGGAGGACA 000400 000401 TACTGAAACA TCAGGCTAGC ATTAGTGAAC TCAAGCGCAA TTTTATGGAA TCCACACCTG AGCCGCGCCC TAATGAATGG 000480 000481 GAAAAACGAC GTATCACACC TCTGTCCCTA CAGACACAAG GGAGTTCACA TGAGACTCTG AATATAGTGG AGGAGAAGAA 000560 000561 GCGGGCAGAG GT |
Predicted Small Protein
Name | NONHSAT114910_smProtein_200:385 |
Length | 62 |
Molecular weight | 7227.6581 |
Aromaticity | 0.262295081967 |
Instability index | 40.7214754098 |
Isoelectric point | 5.30181884766 |
Runs | 7 |
Runs residual | 0.0380629357452 |
Runs probability | 0.0198475786711 |
Amino acid sequence | MNLLIDNNMALETWHFSCFTMVFFLIVSLLCLIFWFYFCPTGFFPFGFFPPLLRYILLGT G |
Secondary structure | LLEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLHHHHHHHHLL L |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL L |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii i |