NONHSAT114960
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114960 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1345 nt |
Genomic location |
chr6+:132496811..132509891 |
Exon number |
2 |
Exons |
132496811..132497316,132509053..132509891 |
Genome context |
|
Sequence |
000001 ACAAGTCTCT AGGAAGTTCC AAGCTTTCCC TCATCTTCCT GTCTTCTTCT GATCCCTCCA AACTTTTGAA CCTCTGCCCA 000080
000081 TTACCCAGTT CCAAAGTCAC TTCCACATTT TCAGGTATCT TTATAGCAAT GCCCCACTTC TCTGGTACCA ATTTTCTGTA 000160 000161 TTAGTTTGTT CTCACACCAC TATAAAGACA TACCTGAGAC TGGGTAATTT ATGGAGAAAA GAGGTTTAAT TGACTCACAG 000240 000241 TTCAGCAGGC TGTACAAGAG GCTTGGCTGG GGAGGCATCA GGAAACTCAC AATCACAGTG GAAAGCAAAG GAGAAGCAGG 000320 000321 CATAATTGTC ACATGGAAGA GCAGAGAGAG AGAGAGCAAA GGGGAAAGTG CTACACACTT TTTTTATTTT TATTTTTTGA 000400 000401 GACAGAGTCT CTCTTTGTTG CCAGGCTGGA GTGCAATGGC ATGATCTTGG CTCACTGCAA CCTCCGACTC CCTGGTTAAA 000480 000481 GCAATTCTCC TGCCTCAGCG TCCCGAATCA TTCAATGTTA TGAGGTTCCA AAACAAAAAC AATTAAACTA TACTGTTAAG 000560 000561 GAATATATTT TGGAAGACAA ACAAAACAAA GGAAGCATAA ACTCAGTATT CTGGAGAGTG CTTACCTCTT GGGACAGGAA 000640 000641 AATGAAATAC AAAGAACTAA AGAAGTATGT ATAAGTAGTT TCAAAATGGT TGGCAGTATT CCAGTTCATG AATCTGGAAA 000720 000721 TGTTTTGTTT CTATTTATTT CACTATTATC CTTCATAATT TATATATATG TTACATATAG TTTATATGCG TTAACTATAT 000800 000801 ACAAAGAAAA CTTTAGGGCC AGGCACAGTG GCTCATGCCT GTAATCCCAG CACTTTGGGA GGCCGAGGCG GTTGGATCAC 000880 000881 CTGAGGTCAG GAGTTTGAAA TCAGCCTGGC AAACATGGTG AAACCCCATC TCTACTAAAA ATACAAAAAA AAAAAAAAAT 000960 000961 TAGCTGGGTG GGGTGGCGGG CACCTGTAAT CCCAGCTACT CAGGAGGCTG AGGCAGGAGA ATCATTTCAA CCCAGGAGGT 001040 001041 GGAGGTTGCA GTGAGCAGAG ATCACGCCAC TGCACTCCAG CCTGGGAGAC AGGGCAAGAC TCCGTTTCAA AAAAAAAAAA 001120 001121 AAAAAAAAAA AAAGGAAACT TTAGAAGTTA TGTATTACAA ATAAGAGGAA TTATATTACA CTAAGACAAA ACACAGAAAT 001200 001201 TATAATGTTC TCACTATCAG TGATAATCAT GGTTAATACT TTGGCATATT TCATTTTAGG ACACACACAC ACATTTCCCT 001280 001281 TGTCTTATTT TTCTAAATAG AATCACATTG TTTAGACTAT TAGGCATTTT CTCTTTCTGC CAATA |
Predicted Small Protein
Name | NONHSAT114960_smProtein_332:478 |
Length | 49 |
Molecular weight | 5740.6393 |
Aromaticity | 0.125 |
Instability index | 43.61875 |
Isoelectric point | 5.69061279297 |
Runs | 8 |
Runs residual | 0.00109649122807 |
Runs probability | 0.021937378555 |
Amino acid sequence | MEEQREREQRGKCYTLFLFLFFETESLFVARLECNGMILAHCNLRLPG |
Secondary structure | LHHHHHHHHLLLEEHHHHHHHHHHHHHHHHHHHHLLHHHHHHLLLLLL |
PRMN | - |
PiMo | - |