NONHSAT114963
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114963 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
745 nt |
Genomic location |
chr6+:132523598..132527324 |
Exon number |
2 |
Exons |
132523598..132523747,132526730..132527324 |
Genome context |
|
Sequence |
000001 TTTCCAAAAT GCCTTAGTTT TAGAGTTTCT CATTTTCATG AAAATAGTAA AAATTAACAA ATATCTATAG ATATAAAATA 000080
000081 CAATCCAATC TCCCACAACT CCCAGATACT GCAGCCATCA CTTTCTAAGG GCTGCGTAAG GAAGCAAATT ATTTTAGAAT 000160 000161 AGTTTTTTTT TCTAGTTTTA TGAAAAATTA CATTGGTAGG TTGACAGGAA TAGAGTTGAA TCTATAGATT GCTTTGGGCA 000240 000241 GAATAACCAT TTACATTATG TTGATTCTTT CAATCCATGA GCATGGAATA TTTTTCCATT TATTTGACAT AAGTTATTTC 000320 000321 TTCTAGCAGT GCTTTGTTCT TCTTGGTGTA AAGATCTTTC ACCTCCTTGG TGAGATGTAC TCCTAGGTAT TTTTTTTTTT 000400 000401 GGCTACTGTA AACGGGATTG TATTTTTGAT TTGGCTTTCA GCTTGCACAT TATTGGTGTG TACAAATGCC ACTGAATTTC 000480 000481 GTACATTGAT TTTGTATCCT TAAAATTTAC TGAAGTTGTG TATCAGTTCC AGGAACATTT TGGTGGAATC TCTAGGGCTT 000560 000561 ACTAGGTGTA GAATCAGGTC ATCCATGAAG AGAGATAGCT TGACTTCTTT CCCTATTTGG GTGCCTTTTA TTTCTTTCTC 000640 000641 TTGCTTGATT GCTCTGGTTA GCATTCCAGT ACTACGTTGA ATGGGAGTGG TGAAAGTAGG CATTTTTGTC TCATTCCATT 000720 000721 TCACAAAGGG AATGCTTCCA CTTTT |
Predicted Small Protein
Name | NONHSAT114963_smProtein_584:679 |
Length | 32 |
Molecular weight | 3537.2843 |
Aromaticity | 0.129032258065 |
Instability index | 70.5322580645 |
Isoelectric point | 9.49639892578 |
Runs | 8 |
Runs residual | 0.0567876344086 |
Runs probability | 0.0187356474121 |
Amino acid sequence | MKRDSLTSFPIWVPFISFSCLIALVSIPVLR |
Secondary structure | LLLLLLLLLLEEELEELHHHHEEEEEELLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTii |