NONHSAT114973
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114973 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
799 nt |
Genomic location |
chr6+:133085799..133086597 |
Exon number |
1 |
Exons |
133085799..133086597 |
Genome context |
|
Sequence |
000001 CAGGACAGGA ATTTAGAGGC TCCAGTAGGG GAAGAAATTC TTTATGAGCT GTTTCTTCAG TTTCTTGTAG GCTAAAACAT 000080
000081 TAACCACAGT GACTACATGC AAAAACAGAA AAATGGAAGT CTGGCATTTG TCTGCATTTT TTAAACACCT TAAAATGTGA 000160 000161 GTCGTATGCC ATAGTTCTAC TGAATGGAGT TTGTTTATAT GGAAAGATCA ATTCATGCAC AATATCAATT GGAAATTCTC 000240 000241 ACTCTTCTGA ATCATCTCAC CAAAGTTTTC AGTGCTGTGT TATGATAAAT TCCTACAGCT ATATGAATGA AGAAGCTGTG 000320 000321 GGCAGATCTT AAGataaatt aagataattt aagatgttaa agataaattt aataaattta ttattaaGAC AAATTCTTAA 000400 000401 TTCTCACAGC TATATGAATG AAGAATCTGT GGGCAGATCC TCCTTTCCCA TGCAGTTCTT TCCAATTAAT AATGTTGCTT 000480 000481 TACTGCAATA ATACTGTTTT TCCAGAAGAT GCAGTAGCAA GCATACGATC CAATGCCATA GCTGTCTTAC TGCATGAGAT 000560 000561 GATTGCCTAC TTCCTAATTC ACATCCCTGT CTCCCTCACT AAATCGTGTT CCAGAACTAC AGGCTGGACC CAGCTTACTA 000640 000641 ACAACCAAGA CACGAACCAC CAAGCCATTC GCATTTTTAT CAGATAACTA AAACGAAAGA GACAAAAGCC GACCAATAAA 000720 000721 CATGGTGATA GAACAGAAAA CAATAGAAGA AATAATCATA GCCAAAAGTT CTGAAAATAT AGGGAGAAGA AAAGGTATT |
Predicted Small Protein
Name | NONHSAT114973_smProtein_353:490 |
Length | 46 |
Molecular weight | 5235.1114 |
Aromaticity | 0.0888888888889 |
Instability index | 63.0688888889 |
Isoelectric point | 8.36480712891 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.009009009009 |
Amino acid sequence | MLKINLINLLLRQILNSHSYMNEESVGRSSFPMQFFPINNVALLQ |
Secondary structure | LLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLEELLLLHHHLL |
PRMN | - |
PiMo | - |