NONHSAT115033
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115033 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1474 nt |
Genomic location |
chr6+:134759528..134825158 |
Exon number |
3 |
Exons |
134759528..134759659,134785879..134785987,134823926..134825158 |
Genome context |
|
Sequence |
000001 AAAAAACTGA GAATACTATA GCTGATTAAC TTACTGTTTA GTTCTCTTAA AAATATCTAC CTTCTTATCA TTATAATTCT 000080
000081 GGAATGAAAA TCAGGAGGAC TGCCTAGTAC TGCCAATTCT GACAGTGATC TGGCTGGAGT GCAGTGGTGC ACACGCCTCA 000160 000161 CACTGTGACA CAGCGGGAGA GCCCAGAGCG ACAGCTGTTG GAATGACTGC ACTCTTCCTG CTCAAGTCTG ACCTTTCCAA 000240 000241 GCCTTTGTCC TATGTCTGGA GACTTCTTGG AAGCTGGAGC ACACAAATAG CTACAGCAAA CTTGAGGAAT GGGCATGAAT 000320 000321 AGACTGGCTT CGGGGAACCT GCCAGCTTGG CCGTGTGGCC AAGGTAATAG GCAAGCCAAG GCAGAGCTAG AGCTCAGAGC 000400 000401 TGGAGGGGAA ATTAAAGCAG CAAATGTAGA AACATTAAGC CTGAAGAGGC GACGACGTTG AATTCTAAAA TGCAGGCCAA 000480 000481 AGCTCAGACT GCAAGCTGTC TGGCTGCTCC GGGTGTGCCC AGAAGTCAAA GTCCAGCAGG GGCAAAGGTG GAGGTGTGGT 000560 000561 CCTGCACGTG GGGTGTTGGG GGGATGTGGA AGAGGAGGTG CTTTAAGATC CAGAGATTCC AGCTGCCCTG GTGCACCCTT 000640 000641 GGAAGAATAA AAGGCTAGGA ACTGGACAAG TCAGGCTCGA GTCCAAGCTG CCTGAGGAAT CGGGGAAAGA ATGGAGCTCA 000720 000721 GAGTGGGAGG TCAGGGCAGT ATTTAAAAAT CCAGGATAGC AGCAAAGCTG GCGGTGGCCC CTGACTCTGG TAAGGGCAGC 000800 000801 CTGCAGCACC ATGCCAAGGG GGGCCTGACT GATCATGCCC TGCATTTGCA AACAAGGATT AGTAGGGTAT GAGTAGGATT 000880 000881 CTGCTGGTGC CTGGGAAGGC AGTGCCATCT ACAACTTTAC AAAGTTTTAA CAAAGGCCTG AAGGACACAA CCTTCCCCAA 000960 000961 AGTCCTGACG TCGCTGTTTG CTGGCAACAA ATAGAGTCAA AAGAAGAGAG GCACAGAATG TGCCAGGGGT GTGCTGCGTA 001040 001041 CAGCCCCGAT GACCACAAGG CCTTCTTGGG TCAAGTTCTG CCATCTCTGG TTAAGATGGG CTCACCCTCT AGGACCCTGA 001120 001121 TTGAGTCCTC GGACCACCAA GAGTGCCCCA CCAAGAGCCT CCCTCTTCTG GTGACTCGTG CCTGCTTCCC GTGGAGAGCT 001200 001201 CCAGAAGGGA GGAAACTGTG AGGAGGTGGA GAACGTGGCA GGGATCCTAA CTTTCTTACT GAAGGAAGTT CTTCACAAGT 001280 001281 ACCCATCTGC CTTCAGGGAA GAAAACATAA CTCATTTTGG TCTTTCAAAT TCAGTTCTCA AAACCAAATC CTGTTGTCAG 001360 001361 CAATCTGTGT CCCAACGCCT TCTTCAGCAA CAGCATTTTC CCTGTGGAAT TAGTTTCCAA TGTTCTTTCT TAAATAAACC 001440 001441 ACTGAAGATT AAAAGGAATC CAGATACCCA CCAC |
Predicted Small Protein
Name | NONHSAT115033_smProtein_308:460 |
Length | 51 |
Molecular weight | 5477.2779 |
Aromaticity | 0.02 |
Instability index | 62.608 |
Isoelectric point | 11.2936401367 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0216098451393 |
Amino acid sequence | MGMNRLASGNLPAWPCGQGNRQAKAELELRAGGEIKAANVETLSLKRRRR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLEEEEELEEELLLLEELL |
PRMN | - |
PiMo | - |