NONHSAT115059
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT115059 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1520 nt |
Genomic location |
chr6-:135353366..135354885 |
Exon number |
1 |
Exons |
135353366..135354885 |
Genome context |
|
Sequence |
000001 TCTTTTATAA CAAAGTAATT TTCAAGTGGA AATGCAATAC TTTTAAAACC ATATAGTAGA CCTTCTAGGG TGAACTAGGT 000080
000081 CTCCATTTGT TGGCTGATTA GGGTTGTAAC TACTAGGTAT GAGATTCTTT TGGTGGGGAA AAAATTAGAT ATTATAGGGT 000160 000161 GGTAAGAGAA GGCAACAATA CCTTAAATAG GTTTCCAGGC TTCCTATTTT CCTTGGCTTG GCTGCTGGTC TGTCAGGCAT 000240 000241 GTACATGACA AGTACTTGCC CTGTTGACTA AGGGAATGTC ACAGTCTCTT TGAGACTGCG AAGGTGGAAC TGAGCAGACC 000320 000321 TTTCCACCTT CCACCCTTGG CCATCGATCC TTGGTAAAAA GCCAAGTGTC TGCTTATTCA TGAATACACT CCTTGTGATG 000400 000401 ATTGTTGGCA CTAAGTGTAT ATTCTGTACC AGCTGCTGTT TATTGATTGC TGTCTTAGTA GCTCAGGTAT GCTACGTGTT 000480 000481 TTAGTTGACT TTATTTTCCA GTTCAGCTGT AAATTTTAAG ATGCAAAGCT GTTTTTATTT GCATTATGAT CAAGGGCATT 000560 000561 AATAATTTAC TTTAGAAATA GAAATAATAT TGTAATTATA TTCTAAATGA TATAAAATAC ATTATAAACA ATTTTTGCTC 000640 000641 TTCACTCTTT TTGGTTTCTT AAAAGATCTG ATGTTGTTCA TGGATGGATG TTTTGTCCTT TTGCATTCTA AAGTCTTTAG 000720 000721 GTGGCTCTTT TGGATATGAT TCTTCTTGCA ATAAATTGCC AAGAACCAGG GTTTCATTTC TGTACAGAGC ACTTTTTAAA 000800 000801 ACTTTTCCTT TTTCCTAGTT ACTAAACTGG CATTTTAACC TCTTTTTCTC CTTTTAGCTT TGAATCTGTC TTTCTTAAAC 000880 000881 TTGTCTTTTA CTCTTTTTCT TCTCATATGT ATTAATAACT ATAGTCAGTG TTTTATATTT AGTTTTTAGT ACTCAGTGGG 000960 000961 AGGTCATGTA ACTAATTGTC ATACCAGGGA TAAAACTAAT AAGGTGCTCA TTTTTTGTAA GTAAAAGGAA CCACTGAAGA 001040 001041 TAAAATACGG TTATAGAGAA GAATAATGAG TTCTCATATG ATTATTTACC TTTTTAAATT GACCCTGAAT CTGTATGTGG 001120 001121 ACCATTGCAA ATAAACAAGT ATACATTGTA TGTTGAGAAA GTACTGTGTA TCAACATGTT TTTTGTGTTC ATGCAGGTAT 001200 001201 ATATTTGGTT ATAAAGTCAG TTTTATAATA GTTTAGAAAT TGTTTTATAT ATAAACAGAT TATATATAAA TGTGGACTAG 001280 001281 ACAGGGAGGG ATTAATATGA ATTTCTATAC TAGTTTTCCT TTACCTATAT ATTTATAATG ACATAAAGCT CAGCTTATGC 001360 001361 AGTTATACAA TTTTAATTTT TAGATTGTAA AAAATTTGTC ACATTTTGAA TATATATATT TTGTAAAAGC TACATTGAAA 001440 001441 GAAATTAAAA TTCTGAGATT TTCCTAAATC AAATGTAAAA ACATACAATC TATCCATTAG GATTTTCTAT ATAAACTTGA 001520 |
Predicted Small Protein
Name | NONHSAT115059_smProtein_683:817 |
Length | 45 |
Molecular weight | 5000.814 |
Aromaticity | 0.181818181818 |
Instability index | 45.0568181818 |
Isoelectric point | 9.58978271484 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0102707749767 |
Amino acid sequence | MDVLSFCILKSLGGSFGYDSSCNKLPRTRVSFLYRALFKTFPFS |
Secondary structure | LLEEELLEELLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |