NONHSAT115144
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115144 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1360 nt |
Genomic location |
chr6-:137303296..137314368 |
Exon number |
3 |
Exons |
137303296..137304290,137311191..137311497,137314311..137314368 |
Genome context |
|
Sequence |
000001 TAAGAAGTGT CTTTCGCCTC CTGCCATGAT TCTGAGGTCT CCCCAGCCAT GTGGAACTGG GAAGAATGGA AGGCAACGCC 000080
000081 TCCGAATTAA ATTTTGGGAC CCCCAGTAAA ATTTCAGGAA AGCCCAGAAC TGATCTGAGA ATGCACAAAC TTGGCATGTC 000160 000161 TTTGACAGAG AAGGCTCTGG GATTTCAGCG CGTTCATTGC CCTCCACTAA GGAGCTGCTC AGCAAAGGGG CTTCCCTCTG 000240 000241 CTCTGCTCTC GGGTTCGGAA TCCGGAGCGA GTTTCCAGTG AGCGGCGCCC GCTGAGCGAG TGGGAAAGCA TCGCGCGTGC 000320 000321 CTTTCCCCGC GCGCGTCTGC GGATCAGCGC AGGCGAGGTG GGTGGGAATG CAGATGTGAG GCTGGAGGCA GTAGAGCCAT 000400 000401 CTCGCAATCA TGCAGCAACA AGCAAGGCAG AGCTGGCATG TTGTTGACTG ATAACATCGA GAAGCTGCTA TATTAATCCT 000480 000481 GGACTGCCAA TCTCTGAACT TCTTGGTATA TTGGGAACAT AAACTCTTTT GGTTAGGCAC TGCGTCAGAT TTCTACTACA 000560 000561 TGCAGCCAAA TGCAATCTAG ATTGAAATAC CCCTTTACCT AAGTTAGCTT TAGCTGTTCT CACAACTTGC TGTTTGTGCT 000640 000641 CCACCCACAG CATATGAGAT CCCTTTTGCC CACAGCACCC TCCCTCAGTG TGATGTCGTC CCCCAACCAG TATTTGCAGG 000720 000721 TTTTTTGTTT TTTTTTTTTA ATCACAAAAC TGCTCTCAGT CTGCCAAATC TGTTGGCCCT AGAGCCAGAA GTGCTATCTC 000800 000801 CTGGGAATTT TTTTTTTTTT TGAGACAGGA TCTTGCTGTC ATCCAGGCTG GAGGGCAGTG GCACACACTC CTGGGCTCAA 000880 000881 GCGATCCTCC TGCTTCAGCC TTCCGAGTGG TTGGGACTAT AGGTGAGTGC CACCACTCCC AGCTAATTGT TTTTATTTTT 000960 000961 TGTAGAGATG GGGATGGGCA GGGATCTTAC TTTTTGCCCA GGCTGGTCTT GAACTCCTGG ACTCAAGCCA TCCTCCTGCC 001040 001041 TTGATCTCTC AAAGTGCTGG GATTACAGGC ATGAGCCACC ATGCCCGGCC TGGGATCTAT TCTTAACCCT TGCCCTAGTC 001120 001121 AGGGTGGTCT TCCTGCAGGA TTAAGAGTTA GACTCTGAGA CTCTGATATC ACACCCTGGC TTGGCCTTCC CTTCCCTGTC 001200 001201 CTACCTCCCC ACCCTGCTAC CAGTTTCTTC TGGAGATATT TCCTGATAGA CTACAGTAGT CCTCCCTTAC CTGAGGTTTA 001280 001281 ACTTTCTGCA GTTTCAGTTA TTGGCAGTCA ACTTAGGTCT GAAAATACTA AATAAAATAT CCAGAAATAA AAAATTTATA 001360 |
Predicted Small Protein
Name | NONHSAT115144_smProtein_65:280 |
Length | 72 |
Molecular weight | 7504.5453 |
Aromaticity | 0.0422535211268 |
Instability index | 55.4591549296 |
Isoelectric point | 9.58880615234 |
Runs | 9 |
Runs residual | 0.0217939214233 |
Runs probability | 0.0360851047126 |
Amino acid sequence | MEGNASELNFGTPSKISGKPRTDLRMHKLGMSLTEKALGFQRVHCPPLRSCSAKGLPSAL LSGSESGASFQ |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLHHHHHHLLLEEELLLLLLLLLLLLLHHH LLLLLLLLLLL |
PRMN | - |
PiMo | - |