NONHSAT115251

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT115251

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

491 nt

Genomic location

chr6-:139670512..139671052

Exon number

2

Exons

139670512..139670807,139670858..139671052

Genome context

Sequence
000001 AAACCCTGTC ATCAAATATG TTTGCCAAAC ACAAAATAAA CAACATAAAA AGAAGCCACA GGGGGGAAAA GACTACCATG 000080
000081 CTTGCAACAC ACAGTCAATT AAACTCAGAA GAGTACAGTG ATGAGCATTT GAGGCATGCT ACCCACATAT GCCTTGCTAT 000160
000161 GAGCACACAG ACTACAGTCA GCCCCGCTAG TTCTATTAAC AGGTTAGAAC CAGACCAACC ACCTCCATCA ATCATGCCAA 000240
000241 ACTCAGAACT GGAAGAACTA CTTCCAGTTC CAACTGAGAA TGTCTTAGGA CTCACATAAA CACTTCCTTC TTCTTTCAGA 000320
000321 ACTGGCGTCG ACCCCCACTT TAAGAAACCA ATCAATTCAA AGACTTTTCC CGCTTTTCAT ATTCCAAGAT CAATCACTGA 000400
000401 ACAATAAAAA TTATGCAGTC ATTTCCCCTG CTATTTCAGA ATTGAAATGT ATTCTCTTGC GTCTGTAAGT TTATGAAGTT 000480
000481 CATTTGCTTA T
[back to top]

Predicted Small Protein

Name NONHSAT115251_smProtein_17:298
Length 94
Molecular weight 10399.6398
Aromaticity 0.0215053763441
Instability index 80.5279569892
Isoelectric point 6.02618408203
Runs 10
Runs residual 0.0233970529669
Runs probability 0.0302508390743
Amino acid sequence MFAKHKINNIKRSHRGEKTTMLATHSQLNSEEYSDEHLRHATHICLAMSTQTTVSPASSI
NRLEPDQPPPSIMPNSELEELLPVPTENVLGLT
Secondary structure LLLLLLLLLLLLLLLLLLEEEEHHHLLLLLLLLLHHHHHHHHHHHHHHLLLLEELLLLLL
LLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLLL
PRMN -
PiMo -