NONHSAT115278
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT115278 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1252 nt |
Genomic location |
chr6+:140430265..140456551 |
Exon number |
3 |
Exons |
140430265..140430710,140449512..140449586,140455821..140456551 |
Genome context |
|
Sequence |
000001 AAAATCATTA ACCTTAGGAG AATTCCATTC AATTACTTGA GTTTTTTCCT CGCTTTTTTT TATTGTTTAT TCCCTATTGT 000080
000081 AACTCTCTTG GCTCTTTAAT TTTCAAAGCC CAGAAATGGG CAAGTTATTC CAATGTTAAA CATCACTAAA TACCAAGAAA 000160 000161 CCCTACTTTT TTCTGTTTAA ATTAATGCTA TTAATTAGAA GATTTCTTAG GATAGACAGT GGAGAGCCGA CTTTTTTGAA 000240 000241 GAGGCAGGGT GAAGCAGATC AGAGAATGTG CTGGGAATAA CGTAATCTGC ATTCAAATCC TGATCCTGCC ATTTTCTTGA 000320 000321 GTGACTTTGT CAATTTATGA TAGTTCTCTG TGCCTCATTT TCCCTTTTGG GTAAAATAAG AAAAGCCATA TTGCCTACTT 000400 000401 CATATGGCTG TTCTGAATAT TAAATGAGTA AACACAGTTA AAGCCAGCAG TTGCTGCCAC TGGGAACCAG ACAGGTAAGC 000480 000481 CTGAGATCTG ACTATATGGG GTTGGTGGCA ATGACCTCAC CACCTAGTAT CATACTGAAC AGGGGAAAAC TGAAAACCTA 000560 000561 TCTTCTAAGA TCTAGAACAA GACAAGGATG CTGACTTTTA TCACTTTTAT TCAACATAGT ACTGAACGTT CTAGCCAGAG 000640 000641 CAATGAGACA AGAGAAATAA ATAAAAAGCA TTCAAATTAG AAAGGAAGAA GTCAATTAGA AAGGAAGAAG TCAAATTATC 000720 000721 CTGGATAGCA GATGATATCA TCTTATATTT AGAAAAATGC AGACATTACC AAAAAACTAT TAGAACTGGC AAATAAATTC 000800 000801 AGTAAACGTT CAGTTTACAA AATCAACACA CAAAAAATTA GTAGCATTTC TATATGCCAA TAGCAAACAA TTTGAAAAAA 000880 000881 AAACCAAGAA AGTAATTCCA TTTACAATGG CTACAAATAA AATATCTAAA AATTAACAAA AGAAGGGAAA GATCTTTTCA 000960 000961 ATTAAAACTA TAAAACATTG ATAAAATAAA TTGAAGAAGA CACAAAAAAT GAAAAGATAG CCCATGTTCA TGGATTGGAA 001040 001041 GCATCAATAT TGTTTAAATG TTCATACTAC CCAAAGCAAT CTACAGATTC AATGCAATCC CTATCAAAAT ATCAATGACA 001120 001121 TTCTTCACAA AAAAACTTAA CATTTATATG AAACCACAAA AGATCCAGAA TTACCAAAGC CACCCTGAGC AAAAATAACA 001200 001201 AAACTGGAAA AATCACATTA TCTGACTTCG AATTATACTA CAAAGCTATA GT |
Predicted Small Protein
Name | NONHSAT115278_smProtein_587:679 |
Length | 31 |
Molecular weight | 3564.8942 |
Aromaticity | 0.0666666666667 |
Instability index | 80.76 |
Isoelectric point | 8.38458251953 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0379614909027 |
Amino acid sequence | MLTFITFIQHSTERSSQSNETREINKKHSN |
Secondary structure | LEEEEEEEELLLLLLLLLLHHHHHHHHLLL |
PRMN | - |
PiMo | - |