NONHSAT115281

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT115281

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

755 nt

Genomic location

chr6+:140449512..140456495

Exon number

2

Exons

140449512..140449591,140455821..140456495

Genome context

Sequence
000001 GCAGTTGCTG CCACTGGGAA CCAGACAGGT AAGCCTGAGA TCTGACTATA TGGGGTTGGT GGCAATGACC TCACCCCAAC 000080
000081 ACCTAGTATC ATACTGAACA GGGGAAAACT GAAAACCTAT CTTCTAAGAT CTAGAACAAG ACAAGGATGC TGACTTTTAT 000160
000161 CACTTTTATT CAACATAGTA CTGAACGTTC TAGCCAGAGC AATGAGACAA GAGAAATAAA TAAAAAGCAT TCAAATTAGA 000240
000241 AAGGAAGAAG TCAATTAGAA AGGAAGAAGT CAAATTATCC TGGATAGCAG ATGATATCAT CTTATATTTA GAAAAATGCA 000320
000321 GACATTACCA AAAAACTATT AGAACTGGCA AATAAATTCA GTAAACGTTC AGTTTACAAA ATCAACACAC AAAAAATTAG 000400
000401 TAGCATTTCT ATATGCCAAT AGCAAACAAT TTGAAAAAAA AACCAAGAAA GTAATTCCAT TTACAATGGC TACAAATAAA 000480
000481 ATATCTAAAA ATTAACAAAA GAAGGGAAAG ATCTTTTCAA TTAAAACTAT AAAACATTGA TAAAATAAAT TGAAGAAGAC 000560
000561 ACAAAAAATG AAAAGATAGC CCATGTTCAT GGATTGGAAG CATCAATATT GTTTAAATGT TCATACTACC CAAAGCAATC 000640
000641 TACAGATTCA ATGCAATCCC TATCAAAATA TCAATGACAT TCTTCACAAA AAAACTTAAC ATTTATATGA AACCACAAAA 000720
000721 GATCCAGAAT TACCAAAGCC ACCCTGAGCA AAAAT
[back to top]

Predicted Small Protein

Name NONHSAT115281_smProtein_146:238
Length 31
Molecular weight 3564.8942
Aromaticity 0.0666666666667
Instability index 80.76
Isoelectric point 8.38458251953
Runs 5
Runs residual 0.0355855855856
Runs probability 0.0379614909027
Amino acid sequence MLTFITFIQHSTERSSQSNETREINKKHSN
Secondary structure LEEEEEEEELLLLLLLLLLHHHHHHHHLLL
PRMN -
PiMo -