NONHSAT115300
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115300 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
769 nt |
Genomic location |
chr6+:142198752..142200254 |
Exon number |
2 |
Exons |
142198752..142199114,142199849..142200254 |
Genome context |
|
Sequence |
000001 ataataagtt tggaaggtcc tgaaatttta ttttcttttC CCAATATGGT AATCTGTTTT TTTCCTTCAT GAGAATAAAC 000080
000081 ACAAACTCAT GCCTTCTCTA GAATGAAAGA CACTAGTCCA ATCAGTTGCA GTGTATCTTT AGGAAAGTGC CCAGCAATGA 000160 000161 ACTCACTGAA CACTGAACTG AAAGTTTTAG TAAAGTTACA TGGGGTAGCT GCCTTGAATA TACTTGCAGc agggctccaa 000240 000241 ctacagtgac aaagatgaac caaggacccc agctacagtg ctctgaaatc catgacggca tttgcaacaa aaccaagctt 000320 000321 cctacagact gacggtaacc agtaactgaa ccccagagga atgaggtgtt tcccccaata aaatctttac ctgctttggt 000400 000401 gtctacatct cagaagacca agacCCAAGA CTAGCACCAC tgataccagg agtagcccaa gaatgcaagt ggtaatttgg 000480 000481 ggatggctca ctcctttccc tgacacagaa gaagatgcca ttctgtcaca aggtgatgac tcattgttac agcttttgac 000560 000561 agtgtgacct ggaaaaatgt ccaggggtag gaaatgctgc agcatgtgca aaaatacagg cacctagaaa acatggggag 000640 000641 aaagggaatg cctaaaagga cagcaacatt ggttggttac tactaaattg tattgacact ctgcaaaggc atggtgaaat 000720 000721 agtgagtgat cttaacaagt atttaataac tacatgtgGG TTTAGGTGG |
Predicted Small Protein
Name | NONHSAT115300_smProtein_593:685 |
Length | 31 |
Molecular weight | 3607.2401 |
Aromaticity | 0.1 |
Instability index | 42.4533333333 |
Isoelectric point | 10.2830200195 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0331390213743 |
Amino acid sequence | MLQHVQKYRHLENMGRKGMPKRTATLVGYY |
Secondary structure | LHHHHHHHHHHHHLLLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |