NONHSAT115305
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115305 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
913 nt |
Genomic location |
chr6+:142495920..142497981 |
Exon number |
3 |
Exons |
142495920..142496027,142496680..142496862,142497360..142497981 |
Genome context |
|
Sequence |
000001 GTTTTTGCCC TGTTATTTCA CGTGAGAAGT GGTGGTTTAA AAGAGCCTGG CGTCTCTCTT GCTGCCTCTC CTGCCTTGCG 000080
000081 ACACGCTGGC TTCCTTTTGC CTTCCATCTT CATTTTTGTG TATTGTATTT TTGAATAAAT TATATTGCAA GTACTTGAAG 000160 000161 AGGGGGCTTT GTCTTCTTGA TTAGTTTCTG CTTGAAAAGT TGCTATAGTG TTTCATTTTT TAACCTGTAG ATGGAAAAAT 000240 000241 GCCTTACACT TGTTTATATA TAACTTATTT TATTTCATAA CTTTTCTAAA ATTTGGTTAA GATTAATACT GCCAAGTTAG 000320 000321 GTAGAACATG AAAATTACAG GTGAAAGATA ATGCTATTCT TATATATGGA GTTTTTGCTA TTTGAGGGAA TGAGATGAAT 000400 000401 ATGTTTTCTG CCCTCGTTGA GCTTATGTTC TAACCTGGAA AGAGAAACAG AATAACTCTA ATGATACATG ATGTATTAAT 000480 000481 GAAATGTAGG GAAGGTATGC ATTGGCAGTA CCTAACATTA GCCTGGCACT ATGCTTAGAC ACCTTGTTTC ATCTTTCACA 000560 000561 ACTCTGAATT ATAGTGAGAA AACTGAGGGT CAGAAAAATA TAAAGTGCTT GGCCCCAGAT ACATAGCCCA GGACAATATT 000640 000641 TCTCAAACTC TCTGTGATAA AGGTTCAGCC TTTTTTTTTT TTTTTAAATT TTCAATTCTT TGCAGATGAT TTTGTAAAAT 000720 000721 ACAAATGCAA GTAATAAATG AATTACAAAA GAGAAAATTT AAAAAGGCAT ACAGATAGAT ATACAGCATA ATTTGCTATG 000800 000801 TGTGTTTCAA ATATTTCTAA ATCCAGTTTC AGTATTATGT TGTCACAAAC TCGTAAGCAG TTTTGCAGAC CAGCAGTGTT 000880 000881 TCTGGGACCA CATTTTGATT GGCACAGATC TAG |
Predicted Small Protein
Name | NONHSAT115305_smProtein_530:625 |
Length | 32 |
Molecular weight | 3526.0038 |
Aromaticity | 0.0645161290323 |
Instability index | 57.3225806452 |
Isoelectric point | 7.93975830078 |
Runs | 6 |
Runs residual | 0.00772849462366 |
Runs probability | 0.0307513395749 |
Amino acid sequence | MLRHLVSSFTTLNYSEKTEGQKNIKCLAPDT |
Secondary structure | LHHHHEELLLLLLLLLLLLLLLEEEELLLLL |
PRMN | - |
PiMo | - |