NONHSAT115318

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT115318

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2293 nt

Genomic location

chr6-:142889285..143000719

Exon number

3

Exons

142889285..142891213,142907637..142907823,143000543..143000719

Genome context

Sequence
000001 CAGGATCACC TTCTGGGACA CCAGGAGAGG AGAGTGGGTA GAGAATAGTG GACCTGCGCT CCTAGCATGT CTGTCTCCTC 000080
000081 TCACTTGCTT GATCTGGCAT GTGGAGCATA ATAAGATACT GGGCTGTAGC AGAAAAATCT TTGGACTCCT AGGATGTCTC 000160
000161 CCCTGGCCTT TCTGCCAACA ACAGTTAAAA TTATATTCAA TGATATTAAC AGTTCTTTCT TTTATTTCCC AAATACATTC 000240
000241 TGATATAAAT TGTGATAAAG AAAATGGGTT TACATGTAAT TAAAGTTTTT ATATCAATAT TTTTAAATAA CTATAAAGCT 000320
000321 CTAATTTGTG GGTTACATGT ACATCATTAG AACAGACAGG GTGCCTAGCT TTATTTGTCA TCTATCTCTT CTATGAGACT 000400
000401 CTAAACTTGC AAACTGCCAA TCCTGCCTGA GAGTAGGTGT TTCTGGGGAG GGTGAACTGA GAAAGGCATG GATGTGGTTT 000480
000481 GGGAAAAGAG GGATGTGAAT TTCACAACAG CAAAATGACT GTCTAAACCC ACTTCAGAGA GAAGGAAATG GCTTAGTGAC 000560
000561 AAACATCTCA GGTGTGGGAA GTGAACTGAA ATGGCTTTGA TTCCGTAGTG TGAAAAGAAC AAAAGAGTTC TTTGCTTATC 000640
000641 ATTCAGCTGC CTCAGACTCC TCCACCCTTT CCCTCTTCCT GCCTCCCTCT CATGTTCTGT AAGCTCAGTC CTTTGGAAAG 000720
000721 TAAAATCTTG CTGCTCCAGC ATTTAATGTT ATGCCATTGC TCAGCAATGA TCAGGATCTG AAAAATATCT CATCAGCAAC 000800
000801 TTAAACATTA ATCATAGGTT TTTGAACTTT AAATAGTTGC TTGAACTCTA GCAAATCTTG AGTTAGATAA ATAAAAATGC 000880
000881 ACACAAGAGG TTTCAGTTGT CATTCAAATG CTCACAGTTT ATTTGGTCTC TGAGGCTCTG CAGCCTGTAA GAAAGAAGGA 000960
000961 GTTCTTTGCA TTTTGGTACT TCTGAGTAAA AGCAGTTGTG AAAAATATGT AAGGTGATAG CTCATTATGC ATCTTCTGTG 001040
001041 AATTTCAGGG AAATGTAAGG TTGGAGGTTT GATCAGTCTT TAGCTCTTTC CCTCTGCCAC TCTAATTCAT ACCCATTGAT 001120
001121 GAGTCAGAAG CAGACTCTCA GAAAAGAGAA CTAAAGCCAT AGCTCAGAAA AAGTAAGTTT TATTTAGTGT TACATGTTAC 001200
001201 TTTTATTAAA GAAACCATGG AAGATTTTCT GAACCAAAGG AAGACTATAA TGTGGTTGGC TAGAAATGAA GATAAAAGGT 001280
001281 TTCTCCAGAA GGCAGGAGGC AAACTCACAG CATTTCCTCC CTGTTGCTAA GTTATGTAAG GAGCAAGATC ATAATCAGAA 001360
001361 TGTTTCTTTG GTGAGCATGG AGCTTAATTT AAAAAGGAAT TCAGATGATC TCATAAAGAG TCCTTCAACT GAAAGAGGAA 001440
001441 TAGCCTTGCC TGTGGATAAC GCATTTATAG TTCCACTGAC CAAGAGTCCT CTCACTGGGC TGTACTGAAT AAATACCCTT 001520
001521 CAACAAAGTC CTGTGTGCTA TGCAGGTTAT CTGCTGGTGA TAAATTTTAT TTTCTTTATG AACTCAAAAT TTCATAGAAT 001600
001601 CATGAGCAAA GACATATTCA ACAATTTGAT TTGATTTATA CAAAGAAAGT AAAAACCTCC CAAAAAACAA AGCACAAAAA 001680
001681 CCCATCTTTT CATAAACTTC TTCAAGAGCA CCTCTACTGT ATTTAGTGAT AGATACATGA ATCTAAATCA GGTATCTAAG 001760
001761 GATAAAATAA TGATGTGGGA AGAGATTGAA ATGATGCTGG GAACAGAGAA ATTTACAGGG AGGAATAATT TGGTTGGAAT 001840
001841 CTACAAGAAT GGAAAGAGGT GCTCTCTAGA CTCCCCTATA CACATAGTGC AATGCTGACC TGCATATCCA CTGATGTGAT 001920
001921 ATTTCTCATG ATACCAGTGC CTTATGATCA GGAAGGGATA TTTCCGGCAT GGTCGTTTCA ATAGTAGAGA TGGATTTGAG 002000
002001 TTAATGTATC ATCCATACCC TCTTGCTTGG TCCCCCTTGT GGCTTTTGAA TAGGATTTCT GAACAGCTAG GACACAGTCT 002080
002081 GTGGTCATGG AGCAGTATTA GGCTAACAAG TGTTCAAAGT CTTGTTTTTG GCCTCCAAGG TGAGGAGATG TATCCGGCTG 002160
002161 AGAAAAAGGC CATATAAATA AAATAGGTTT ATTTTATTTA TGGGGCAGAG GCTCTCAAAC TTCAATGTGC ATCACTGCCC 002240
002241 CGAAGAGGGT GTTTAAAATG CACATGTCTA GATGACTGCT AGAGATTTAG AAA
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Predicted Small Protein

Name NONHSAT115318_smProtein_1265:1507
Length 81
Molecular weight 8979.2433
Aromaticity 0.05
Instability index 53.165
Isoelectric point 9.30035400391
Runs 11
Runs residual 0.00131578947368
Runs probability 0.0472852531676
Amino acid sequence MKIKGFSRRQEANSQHFLPVAKLCKEQDHNQNVSLVSMELNLKRNSDDLIKSPSTERGIA
LPVDNAFIVPLTKSPLTGLY
Secondary structure LLLLLLLLHHHHLLLLLLHHHHHHHHLLLLLLEEEEEEEELLLLLLLLLLLLLLLLLLEE
ELLLLLEEEELLLLLLLLLL
PRMN -
PiMo -