NONHSAT115327
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115327 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
814 nt |
Genomic location |
chr6-:143288209..143360377 |
Exon number |
3 |
Exons |
143288209..143288578,143342803..143343090,143360222..143360377 |
Genome context |
|
Sequence |
000001 CGGGCATACA GATAGTGATG TGCATAGGGG CAAAAGAAGT CATAATGGGA AAGCCATGTG GAGGCAGCAG AGTGCCTGGT 000080
000081 GTCCAAGGAA GCATGTATAG GGGGTACATA TGGTGGCAGT TGTATGCTCA GCAGAAGAAG CACCAGGGAG GTGAAGgtca 000160 000161 cgttgacagc atgaaccttc gatgtgatgt gaggaaaatg gcattctacc tctgtgttct tcctccccaa aatttgtaac 000240 000241 caccatctaa tcatgaggaa aacatcatac aagtccaaat tgaggaagat tctacaaaat gcctgattaa tattcatcga 000320 000321 aactgtcaag gtcatcaaaa gcaaggaaag tctgagaaac tgccacagcc taaagacaat ccagggaaac gtgatgactc 000400 000401 agtggtattc ggggtgggtt tctggaacag caaaaggaca acaggtaccc tgagccacta tctaaattgt ctgcttacct 000480 000481 tatgaagaca ccatAAGGAG GTATAACGTG TGGTGAGCAC AGGTGAAGAG CTAGAGGCCT GAAACTAGAT GGGGAGGGAG 000560 000561 AAGCCAGCCA TGCCTGCATC CAGGGCTGCA CTCAGCCTCC CAGCATCTGT GCAGAGGCAT CAGTCAAGCC ACAGCTAACT 000640 000641 GCAGTCCCAG CTAACATTAT GTGGAAcatc ccagtcatcc cagatcatcc cagtcaACCA AGATCATAAA ATTGTTTTCA 000720 000721 GCTATTAAGT TTAAATATGT GAAATAAGGA GATAAAAATA CTGACTTGGA CTCTGTCTGA ATGAAAGGAT TAGTAGATTA 000800 000801 GATTAGTGAT TCTT |
Predicted Small Protein
Name | NONHSAT115327_smProtein_17:238 |
Length | 74 |
Molecular weight | 8217.6056 |
Aromaticity | 0.0958904109589 |
Instability index | 40.9398630137 |
Isoelectric point | 9.26666259766 |
Runs | 13 |
Runs residual | 0.0339372514361 |
Runs probability | 0.0400649518298 |
Amino acid sequence | MCIGAKEVIMGKPCGGSRVPGVQGSMYRGYIWWQLYAQQKKHQGGEGHVDSMNLRCDVRK MAFYLCVLPPQNL |
Secondary structure | LEELLEEEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLEEELLLLLEEHHHH HHEEEEELLLLLL |
PRMN | - |
PiMo | - |