NONHSAT115388
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115388 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
595 nt |
Genomic location |
chr6+:145244723..145249971 |
Exon number |
2 |
Exons |
145244723..145244890,145249545..145249971 |
Genome context |
|
Sequence |
000001 cttcacactg acgtgcatga AAtttgttgc catgacttgg atcgggggac ctccctttgg agatcaatcc cccatcctcc 000080
000081 tgctctttgc tccgtgagaa agatccacct atgacctcag gtcctcagac tgaccagccc aagaaacatc tcaccaattt 000160 000161 caaatccgta caagaaggca ggaatgtcag gcctctgagc ccaagccaag ccatcgcatc ccctgtgact tgcacgtata 000240 000241 cgcccagatg gcctgaagta actgaagaat cacaaaagaa gtgaaaaggc cctgcccggc cttaactgat gacattccac 000320 000321 cattgtgatt tgttcctgcc ccaccttaac tgagtgatta accctgtgaa tttccttccc ctggctcaga agctctccca 000400 000401 ctgagcacct tgtgaccccc gcccctgccc accagagaac aacccccttt gactgtaatt ttcctttacc ttcccaaatc 000480 000481 ctataaaagg gccccacccg tatctccctt cgctgactct cttttcggac tcagctcacc tgcacccagg tgaaataaac 000560 000561 agctttattg ctcacacaaa tcctgtttgg tggtc |
Predicted Small Protein
Name | NONHSAT115388_smProtein_110:283 |
Length | 58 |
Molecular weight | 6398.1163 |
Aromaticity | 0.0526315789474 |
Instability index | 71.5263157895 |
Isoelectric point | 9.42803955078 |
Runs | 9 |
Runs residual | 0.00394736842105 |
Runs probability | 0.0152211034564 |
Amino acid sequence | MTSGPQTDQPKKHLTNFKSVQEGRNVRPLSPSQAIASPVTCTYTPRWPEVTEESQKK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEELLLLLLEEELLLEEEELLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |