NONHSAT115393
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115393 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1879 nt |
Genomic location |
chr6-:145810766..145813228 |
Exon number |
2 |
Exons |
145810766..145812318,145812903..145813228 |
Genome context |
|
Sequence |
000001 ATGGAGGTTG AAGAGAGGAT GAAATGTTTT CAAAAGTTTC CTGAACATCA TCAGATGATC CTCGACTGAC TGAATAAACA 000080
000081 GCAAGATCGG GACTGGTTTA CTGACATCAT CCTGATTGTC AACAGACACC ATTTTAAGGC TCACAAGGCT CTTTTGGCTG 000160 000161 CTTGCAGTAA GTTCTTCTAT AAATTCTTTC AATTTACCCA GGAACCTTTG GTGGAGATAG AAGTTGTTGG TAAAATGACC 000240 000241 TTTTGTAATT TAATTCAGTT CACATATACA GCAAAATAAT TGATACAGGA GAAGAAGAAG CCAATGATGT ATGGAAAGCA 000320 000321 GCAGAGTTAT GAAAGCCCTT GAAGTCAGGA ACAAAGAAAA CTCAGCTCCA TTAGAGGAAA ATACCACAAG AAAAAAGGTG 000400 000401 GCCAAATAAA AGGAAGATTG CAGCAACTTC AAATGTTATC ACAGAATCAT TGCCATCTGC AGAATCAGAA CCTGTTGAAA 000480 000481 TTGAGGTAGA GATTGCTGAA GGCACAATTG AAGTGAAGAT GAAGGCATCA AAACATTAGA GGAAGTGGAT TCTGCCAAGC 000560 000561 ATCCATAAAG TACACACAGA ACACAAGTTC CTCTAATGAT TCTGCTCTAG CACTGTTGGC AGATATTACC AGCAAGTATC 000640 000641 ATCAAAGTGA CAGAAAAGGG CAGATTAAAG AAGAAGATGG CCATGCATCT GACCCTACAA GCATACAGGT AGAAAGTATC 000720 000721 GAAACTGTGG AACGTCAGTT GTCACATGTG ACAACCTTCA CATGTGAAGG ACTTGTTCCA TTGTGAGAAA TGTAATGGTT 000800 000801 CATTTAAATT GTTTTATCAT TTGAAGGAAC GCATGAAATC ACACTCTACT GAGAGTTTCA AGTGTGAAAT ATGCAATGAA 000880 000881 AGGTATCTTT GGGAGAGCAC ATGGAAACAG CACCTAAATT GTTACCATCT TGAAGAAGGT GGAGTCACTA AGAAGCAAAG 000960 000961 AACTGGGAAG AAAGTTTATG TATGTCAGTA CTGTGAGAAG CAGTTTGACT GTTCTGGACA TTTTAAAGAA CATCTTAGAA 001040 001041 AACATACAGG TGAAAAACCT TTTGAATGTC CAAATTGTCA TGAAAGATTT GCTAGAAATA GCACCCTCAA ATGTCACCTC 001120 001121 ACTGCATGCC AAACTGGAAT AGAGGCAAAA AAGGAAGAAA GAAGCTCTAT AAATGCCATG TCTGCAACAG TGTGTTTAAC 001200 001201 AGCTGGGACC AGTTCAAAGA TCACTTGGTA ATACACACTG GGTGTAAACC CAACTATTGT TCTTTATGTG ACTTGTGGTT 001280 001281 TATGCAAGGA AGTAAATTAA TGAGGCATCT CAGTGACACT ATTTCAGAGC GTCTAGTAAT GGAAGAAGTT CTTTCAGTAG 001360 001361 AAACGTGTGC AAACTGAACC TGTGACATAT CAATGACTAT TATATAACAA ATTGGGAAGG TGCGTGTGCT ACCATTGCTT 001440 001441 CAGGTCCAGG TGGATTCAGC ACAAGTGACT GTGGATTCAG CACAAGTGAC TGTGGAACAC GTCCATCCAG ATCTGCTCCA 001520 001521 GGACAGCCAG GTACTTTGTT CACACGAGTG TGCTTCCAGA GCAGGTCCAA ATAAGTTATC TAGAAGTGGG TCGAATTCAG 001600 001601 ACTGAAGAAG GTACTGAAGT ACACGTAGAG AAGCTTCACT TTGAATGGAT AAATCAGGTG CCAGTGGAAG TACAAACTGA 001680 001681 ACTTCTAGAA GCAGACTTGG ACCACGTGAC CCCAGAAATC TATGAACCGA GAGAAGAGAG AACCTAGCCA AGCAGATGCT 001760 001761 GCTGAGGCTG CCAGGGAAGA TCACGAAGAT GCTGAGGATT AGAGAGCAAG CCAACAGTGG ATTCTGAAGC TGAAAAGGCA 001840 001841 GAGAATGAGG ACAGAACAGC TATGCTGGTT TTAGAATGA |
Predicted Small Protein
Name | NONHSAT115393_smProtein_977:1141 |
Length | 55 |
Molecular weight | 6063.1331 |
Aromaticity | 0.0185185185185 |
Instability index | 51.7925925926 |
Isoelectric point | 6.54351806641 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0497009614659 |
Amino acid sequence | MYVSTVRSSLTVLDILKNILENIQVKNLLNVQIVMKDLLEIAPSNVTSLHAKLE |
Secondary structure | LEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHLLL |
PRMN | - |
PiMo | - |