NONHSAT115441
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115441 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1550 nt |
Genomic location |
chr6-:147182943..147453122 |
Exon number |
12 |
Exons |
147182943..147183155,147185520..147185738,147199251..147199470,147227055..147227152,147232688..147232801,147232920..147233075,147283527..147283702,147293181..147293206,147322577..147322679,147395941..147395983,147440553..147440613,147453002..147453122 |
Genome context |
|
Sequence |
000001 ATTGCATAAT GCAGTAGCCA CTGGATTTGC AGCAGAAACA CTCTGCTACA GAACAAGTGT CTTGGTTCAC AGCAAAGAGG 000080
000081 ACAAAGAAAA CAGCAAGTTT TAGGGGGTTG AATCCTGGAT TCCCCTGGCA AACACCATTC TACTTTCCGT CTCTATGAAT 000160 000161 TTGACTACTC GAAGTACCTC ATGTGAAATG TTGGTGCCAA ATGAACTTTT CTGGTTCTTC TGAATATGCC ACTGTTGCTG 000240 000241 GAGAAATGTC ACTGCTAGAG AACAGAAGAC TATTATTCCA AAGGGTATTT GAGACTGACT GAATCAGGTC TGGAACATTA 000320 000321 TTGAAATGAG ACCCACAAAA GAAGAGATAC TGAGTAATTC AGCATTTCCA GTGACATCCT TCTGGCTGTG CTTCAAAGGG 000400 000401 AAGATGACGC TAGAGCTGGC AGCATGACCA GCACTGTGTA AATCACCCAG ACAGACAACA ACACAACATC CATGAATAGA 000480 000481 TGGCAGAGTT AGCAAGAAAA AATAGCTTGG AGGATGGAAA AACCCCAAAG GATACTCCAG CTAAGAAAGT ATGGACGCTT 000560 000561 CCCCTAGTTT AGAATGCACT TCAGATGGAT TCCAAGCTAG AACAAGGTCT ATCTGGAGGT GAAGTCATGT GACATGAACT 000640 000641 AATGGCTAGA TTTCTACTGA GGAAGCTTGG GGTCCTTGTC TATAAGAGGA TGAAGAGATC CTCCTAGCTT GGCGGAATAC 000720 000721 TCTGCTCTGA TGGAAGTACC ATCCTGGTCC AAACATGAAA GAATTCCCAA CATCAAGATT GATTGAAACA TATTCAATGG 000800 000801 GATGTAGGCT GGTGGCAGAA AGTAGACCCT GGAGAACAGG AGCACTTGGT TTCAAATAAA ATACCTGCAT TAAATATTCA 000880 000881 GCTTTCCTGC ACCTTTATCA TTACATTTGA TTTGCAAAGA AGATAGAAGT CTTAAGTCAC TGTACAAAGA GAAAGATATA 000960 000961 AAAGTTTAAA AAGATACAAT GACTTTCCCA TAGCTAACAA GGAGCCAGCA TGGGTCCAAG TTTTGGCATC GATTTGGGGA 001040 001041 AAATGCTTTC AAACTCTAAA ATCTTATAAA GATGGGGAAA ATAATTACTA ATAAAGGCCT ACTACGGCCT TTTATATGTG 001120 001121 TAACTGGATC TTGGTTCATG CTGAGCTTAA AATTTGATCT TCTGAATATC AGCAGAAAGA CTCTTTCTGG TGAATACAGA 001200 001201 TCTTCTGAGC AATTATCGAC TGACTTTGTC ATTAGACTGC CCTTTCAGAA GGTACAAAAA AAGAAAAAGA AAATTACTAC 001280 001281 TGTGAAGTGA AGTCTGAGCA ACTGGGAAGA AATGCAAGGT GAAATGAAAT GGTGAAGTTG TCAGTGACAT GAATCTTTGC 001360 001361 TCCCTTCTTC ATGGAATATT TCTGATCTAA TAGCCCCTAT ATTTCAAAAG ATGGATATAA ACATCAGATG AATATCACAG 001440 001441 GAAAGCTGGA TTGCTCTGCA GTGAGTGAAA CGTGGAAAGG CCTTTCCCCA CCAAGCAGTA GGCCAAATTG TAACAGTAAG 001520 001521 ATGTATTTGA AATAAAATGG TTCATAGATC |
Predicted Small Protein
Name | NONHSAT115441_smProtein_1427:1534 |
Length | 36 |
Molecular weight | 3844.4194 |
Aromaticity | 0.0571428571429 |
Instability index | 66.6742857143 |
Isoelectric point | 9.23773193359 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0165922224746 |
Amino acid sequence | MNITGKLDCSAVSETWKGLSPPSSRPNCNSKMYLK |
Secondary structure | LLLLEEELLLHHHHHHLLLLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |