NONHSAT115441

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT115441

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1550 nt

Genomic location

chr6-:147182943..147453122

Exon number

12

Exons

147182943..147183155,147185520..147185738,147199251..147199470,147227055..147227152,147232688..147232801,147232920..147233075,147283527..147283702,147293181..147293206,147322577..147322679,147395941..147395983,147440553..147440613,147453002..147453122

Genome context

Sequence
000001 ATTGCATAAT GCAGTAGCCA CTGGATTTGC AGCAGAAACA CTCTGCTACA GAACAAGTGT CTTGGTTCAC AGCAAAGAGG 000080
000081 ACAAAGAAAA CAGCAAGTTT TAGGGGGTTG AATCCTGGAT TCCCCTGGCA AACACCATTC TACTTTCCGT CTCTATGAAT 000160
000161 TTGACTACTC GAAGTACCTC ATGTGAAATG TTGGTGCCAA ATGAACTTTT CTGGTTCTTC TGAATATGCC ACTGTTGCTG 000240
000241 GAGAAATGTC ACTGCTAGAG AACAGAAGAC TATTATTCCA AAGGGTATTT GAGACTGACT GAATCAGGTC TGGAACATTA 000320
000321 TTGAAATGAG ACCCACAAAA GAAGAGATAC TGAGTAATTC AGCATTTCCA GTGACATCCT TCTGGCTGTG CTTCAAAGGG 000400
000401 AAGATGACGC TAGAGCTGGC AGCATGACCA GCACTGTGTA AATCACCCAG ACAGACAACA ACACAACATC CATGAATAGA 000480
000481 TGGCAGAGTT AGCAAGAAAA AATAGCTTGG AGGATGGAAA AACCCCAAAG GATACTCCAG CTAAGAAAGT ATGGACGCTT 000560
000561 CCCCTAGTTT AGAATGCACT TCAGATGGAT TCCAAGCTAG AACAAGGTCT ATCTGGAGGT GAAGTCATGT GACATGAACT 000640
000641 AATGGCTAGA TTTCTACTGA GGAAGCTTGG GGTCCTTGTC TATAAGAGGA TGAAGAGATC CTCCTAGCTT GGCGGAATAC 000720
000721 TCTGCTCTGA TGGAAGTACC ATCCTGGTCC AAACATGAAA GAATTCCCAA CATCAAGATT GATTGAAACA TATTCAATGG 000800
000801 GATGTAGGCT GGTGGCAGAA AGTAGACCCT GGAGAACAGG AGCACTTGGT TTCAAATAAA ATACCTGCAT TAAATATTCA 000880
000881 GCTTTCCTGC ACCTTTATCA TTACATTTGA TTTGCAAAGA AGATAGAAGT CTTAAGTCAC TGTACAAAGA GAAAGATATA 000960
000961 AAAGTTTAAA AAGATACAAT GACTTTCCCA TAGCTAACAA GGAGCCAGCA TGGGTCCAAG TTTTGGCATC GATTTGGGGA 001040
001041 AAATGCTTTC AAACTCTAAA ATCTTATAAA GATGGGGAAA ATAATTACTA ATAAAGGCCT ACTACGGCCT TTTATATGTG 001120
001121 TAACTGGATC TTGGTTCATG CTGAGCTTAA AATTTGATCT TCTGAATATC AGCAGAAAGA CTCTTTCTGG TGAATACAGA 001200
001201 TCTTCTGAGC AATTATCGAC TGACTTTGTC ATTAGACTGC CCTTTCAGAA GGTACAAAAA AAGAAAAAGA AAATTACTAC 001280
001281 TGTGAAGTGA AGTCTGAGCA ACTGGGAAGA AATGCAAGGT GAAATGAAAT GGTGAAGTTG TCAGTGACAT GAATCTTTGC 001360
001361 TCCCTTCTTC ATGGAATATT TCTGATCTAA TAGCCCCTAT ATTTCAAAAG ATGGATATAA ACATCAGATG AATATCACAG 001440
001441 GAAAGCTGGA TTGCTCTGCA GTGAGTGAAA CGTGGAAAGG CCTTTCCCCA CCAAGCAGTA GGCCAAATTG TAACAGTAAG 001520
001521 ATGTATTTGA AATAAAATGG TTCATAGATC
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Predicted Small Protein

Name NONHSAT115441_smProtein_1427:1534
Length 36
Molecular weight 3844.4194
Aromaticity 0.0571428571429
Instability index 66.6742857143
Isoelectric point 9.23773193359
Runs 7
Runs residual 0.0188861985472
Runs probability 0.0165922224746
Amino acid sequence MNITGKLDCSAVSETWKGLSPPSSRPNCNSKMYLK
Secondary structure LLLLEEELLLHHHHHHLLLLLLLLLLLLLLEEEEL
PRMN -
PiMo -