NONHSAT115511
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115511 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
377 nt |
Genomic location |
chr6+:150131176..150132044 |
Exon number |
2 |
Exons |
150131176..150131259,150131752..150132044 |
Genome context |
|
Sequence |
000001 CAGTTGCTGG TACAGTGCTG CACCTGGCTG AGTGAATGGT TTCTTTTGGA GCTGATAAAG CTGCCTTATG AAATCAGCTG 000080
000081 ACAGGGATGA ATTGTAAAAG CAACATCAGC TTGACCAGTA TAAAATTACA GTGGATTGCT CATCTCAGTC CTCAAAGCTT 000160 000161 TTTGAAAACC AACACCATCA CAGCTTGTTT TGGACTTTGT TACACTGTTA TTTTCAGCAT GAAAATGTGT GTTTTTTTAG 000240 000241 GGTTTCTGAT TCTTCAAAGA GGCACAGAGC CAAATTGGTA GAGGAAGGAT GCAAAGTATA AATTTGTGTA ATATTACTTT 000320 000321 AACATGCCCA TATTTTACTT GGAAATATTA AAAGAAAGGG TTCTGTAAAA TGGAAAA |
Predicted Small Protein
Name | NONHSAT115511_smProtein_86:280 |
Length | 65 |
Molecular weight | 7290.6588 |
Aromaticity | 0.125 |
Instability index | 48.415625 |
Isoelectric point | 9.16290283203 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0743881136038 |
Amino acid sequence | MNCKSNISLTSIKLQWIAHLSPQSFLKTNTITACFGLCYTVIFSMKMCVFLGFLILQRGT EPNW |
Secondary structure | LLLLLLLLHHHHHHHHHHHLLLLLLLLLLEEEHHHLLEEEEEEEHHHHHHHHHHHHHLLL LLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLL LLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooooooo oooo |