NONHSAT115756
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115756 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
2226 nt |
Genomic location |
chr6-:159030738..159042668 |
Exon number |
2 |
Exons |
159030738..159032720,159042426..159042668 |
Genome context |
|
Sequence |
000001 ATGGTGCTGG ATTGGCACAA GGTCAGGTAC CACCAGAGCA GAATGTGGGA AGGTGTCCCA GCAAGCGCAG CTGCCTCCGG 000080
000081 GAGTCCGGTG ATGTGGCCCC CTCAGCTGGC CAGCTCAGAG CTCTGTGTTG GGTTCAGGAC GGGCTGGTAG CCCCAAGCGC 000160 000161 CTGAAAACCC AGGAAGAGGA TGGTGTGGCT TGCTTCGCCG AGGTTATCCT GGGGCTCATC CTGCCGCAGA AGTAACTCCT 000240 000241 CCTGTGTGGG CGGGGCCGCC ACCAAAGGCT GCCTGATTCA GAGCACTCAG GGAGTCCTTT CGTCAGGGGG AACCCCTCCA 000320 000321 CATCCTACCA ATCCCTTTCT AGAAGAAATA GCTTCTCTAG AAAAGGAAGC CTGCAGCTTT AAGGCTGATT CCAAAGATAG 000400 000401 TTCTCGTAAC TCCATGAACT CTTAATTTGC AACTGAAGCT GAGAGTCAGA ATGATACGAC TGAGGAACCC AACAAGGTCC 000480 000481 AGAAAAGGAA GACGGATAGA CTTCGACATC AGGGCTCCAC AATGATCTAC CTGGAGGCTA ACCAGGGCAT CCAGGGAAAT 000560 000561 CAATGCCGAA AAGGAAGGGA GAGGCTGTCA CTAGTTCAAA ACCAAGCATA GCAGAGTGTC CCAGTTGTGG AGAAGGACCA 000640 000641 GCTAGGAGTG AAGGACCAGC CAAGACTGAG AAGGAACAGC CAGGAGTGTC ACAGTCACCC CTGCTGAGAA GGATAGTCAA 000720 000721 TCCCAGAGGT CAGTGGAGAA GGACAAGACA GTGCCAGAGA GGAGCAGCTT CTGTGACAGG AGAGTAGTCA CAGACCCTCA 000800 000801 GGAGAAACCC ACTGAGGAGC CCCTTGGGGA CCAAAGGACA GTCACTGACA AATGCTCTCC ACCCCTCGAG TTTCTGGATG 000880 000881 ACTCTCTCAT TTAGAAATCC GAAAGCATAA AGATAGGGAG GTGGTGATGG AGCACCCCTC TTCAGGAAGC AACTGGTCTG 000960 000961 ATCTGGAGAT CTCCACGGTC AGATTCTCTC AGGAGGAACC CGTCCCACTG AAACCCTCAG CCATTCCAGA GCCTTCTTCC 001040 001041 TTCACTACTA TGTCATGTAC CTGCCTCATT TTTACAGTAG TCCTTGGTGT GAGTATGTCA GCTAGTGCAC CAGCAGCCCC 001120 001121 AAGCCTGCCG GCTACCTGTC TGTGAGCAGC AGCAGCAATG ACGCAGCACA GGCTGGGAGG AGCAGCCCGA GTGCCTGAGT 001200 001201 GATTCTTCCC CCAACTCTGC AGTGAGCGCC CATAACGTCT CCAGAGATGT GGAGGCCTCA GAGGAAGGCA GCTCCCAGAA 001280 001281 TTCTCACTCA TTTCACTTCT CCAGAAGCTC GGGAGGAAAA GAGGTGAAGC AAAGAAGAAC ATTCCAAGAG GAGATGCCTC 001360 001361 TGTGTCCTTG TGGAGGACAC ACATCCAGCT CCCTGCCAAA GAGCCACTGG GAGCCAAGCC TAGAGCAGGG CTTCACTGAT 001440 001441 ACCCACTGTC ATTTGGATAT GCTGTATTCC AAGTTGTCTT TCAAAGGGAC CTTGACTAAG TTCAGAAGAA TTTACAGCAG 001520 001521 CTCCTTCTCT AAGGAATTTC AGGGTTGCAT CTCTGACCTC TGCCACCCTC ACCCTGACAA ATTGCCTACG GGGGGAGCTG 001600 001601 TTGAAAGAGA ATCTGGTCTG GGGGGCCTTT GGCTGTCACC CTCATTTTCC ATGTTACTAC AATAAGAGTC AGGAAAGAAA 001680 001681 TCTTTTACAA GCCTTAAGGC ACCCCACGAC TGTGGCATTT GGAGAAACAG GCTTCAATTA CTCCTACAAG TGCACCATGC 001760 001761 CTGTCCCAGA ACATCACAAG GTATTTAAGA GACAGCTTGA GCTGGCTGCG TCTCTAGAGA AGCTTTGGTG ATCCTCTGCC 001840 001841 AGCAAGCTGA CGAGGATCTG CTGGACACCA TGAGAAAATG TGTGTTCTCT GACTACAAGA TACACAAGCA TTGCTTCACT 001920 001921 GCAGCTACCT GGCCATGGAA CCCCTGCTGA AGTACTTTCC CAACGTCGGT GGGCCTCATG GCAGTCCTGA CGTACTCCTC 002000 002001 CACCTGAGAA GCCCGGGAAG TGCTGAGGCA GATCCCACTG GAGAGAATCA TCATGGAAAC GGATGCTCCC TACTTCCTCC 002080 002081 CTAGCCGGGT TCCCAAAAGC CTTTGCCAGT ATGCCCACCT GGGCCTGGCC TTGCATACAG TCCTGGAGAC TGCCAGAGTC 002160 002161 AAAGATCTAG TCTCCCACAC CCTGGCCACT TTGCGTGAGA ACACCAGTTG CCTCTACAGT CTTTAA |
Predicted Small Protein
Name | NONHSAT115756_smProtein_179:424 |
Length | 82 |
Molecular weight | 8492.4032 |
Aromaticity | 0.0493827160494 |
Instability index | 69.2345679012 |
Isoelectric point | 8.47467041016 |
Runs | 9 |
Runs residual | 0.03106859619 |
Runs probability | 0.0328760132683 |
Amino acid sequence | MVWLASPRLSWGSSCRRSNSSCVGGAATKGCLIQSTQGVLSSGGTPPHPTNPFLEEIASL EKEACSFKADSKDSSRNSMNS |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLEELLLLLLLLLLLHHHHHHHHH HHHHHLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |