NONHSAT115847

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT115847

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2002 nt

Genomic location

chr6-:159927977..159930191

Exon number

2

Exons

159927977..159928977,159929191..159930191

Genome context

Sequence
000001 GGGAAGGAGG AATTTTGGCT CAAGACTGAA ACATAGGAAT TCTGCCTGTG TTTCCAGCCT GCCAGACTGC CCCAGAAACT 000080
000081 TCAGACTCAA GTTTGTGACA TCAGCTCTTA CCTGAGTTTC CAGCTGCTGG CCGGCCCTAA GGTTTCAGAC TTGCCAGCTG 000160
000161 CAGCAATCAT GGGAGCCAAT TTCCTAAAAT AAATCTCTTA ACATAAATAT CTTATTGGTT CTGTTTCTCT GGAGAACCCA 000240
000241 GACTGACACA GGGGCTGCGG CAGACACATA CCTTCAGCAA TATCTAAAGG GAGGGCTGCT CCGGGGACAG TGGACCAAAG 000320
000321 GAAACACCCT TGTTGGCTGT AAAGTCTGAA TGGGGCTGTT CTGCTTCACC AGGTTCTATG ACAGAAAATG AACTCAAATC 000400
000401 CCAGGCTTCA GGCAAAGGGT GGTAACTACA GCAGCAAACA TGTCTGGCAG TGCGCAAATA CGTTAAGTAT ATTGTCTCAT 000480
000481 GTCATTAAAA AAAAGACTTT ATTTTTTAAA GCAGTTTTAG ATTTACAGGA AAATTGATCG GAAAGTACAC AGCTCCCATA 000560
000561 TACCAAACCC CCTGCCTCCA TTTTTCCTTG AGATTAACAC CCTGCATGAG TGTGCTACAT TTATTGCAAA CAATGAACCA 000640
000641 AGCTTGAAAA TTACTTTTAA CAAAAGTCCA AGTTTATGTG AGTGTTTATT CCCTGTGTTG TATGGTTCTA GGGGTTTTGA 000720
000721 CAATGGCATT AATACAGTAT CACGCAGAAT ACTTTTCCTG GCCTAAAACT CCCTGCTGCT CCACCTGTTC ATTTCTCTCC 000800
000801 CCTATTTATT TAATTTTCAA AACAATATTA TGAGGTGAAA TTTAAAAAAT TCTTTAATTT ATAAAATTGA TACAATAATT 000880
000881 GTATTTATGG AGTACATAGT AATGTTTTGA AACATGTATA GTGATGAAAT AGAATAATTA GCATATCCAT CATCTCAAAC 000960
000961 ATTTATCATT TCTTTGTGTT GGGAATAGTC AAAGTCCTCT TGAGGTGGGA GAATCACTTG AACCTGGGAA GCAGAGATTG 001040
001041 CATTGAGCCG AGATCGCGCC ACTGCACTCC AGGCTGGGCA ACAGAGCAAG ACTCTGTCTC AAATATATGT ATATGTGTAT 001120
001121 ATATATATAC ACACACATAT ATACATATAT ACACACATAT ATACATATAT GTATACATAC ACATATACGT ATACATGTAT 001200
001201 ACATACACAT ATACGTATAC ATGTATACAT ATATACGTAT ATGTGTATAT GTATATATAC ACACATATAT ACATATATAC 001280
001281 ACATATATAC ATATATACAC ATATATACAT ATATACGCAT ATATACATAT ATACGCATAT ATACACATAT ATGTTTTATA 001360
001361 TATATATATA TAAAACAAAT TATTGTTAAC TATAGTCAGC CTACAGTGCT ATGGAATATT AGAACTTATT CTTCCTAGCT 001440
001441 AGCTGCAATT TTATATCATT TAACCAATCT CTCCCTAGTC CTGCCTCCCT GCTACCTTTC CCAGCCTCTA GTGTCCATTT 001520
001521 ACAGGTGAAT AGATAAAGAA AATGCAGTGT GCATACATAG TGGAATACTA CTCAGCCACA AAAAGTATGA GATCCTGTCA 001600
001601 TTCACAGCAA AATGGATGAA CCTGGAGACA TTACTTTAAG TGAAATGAGT CAGGCATAGG AAGATAAATA CCACATCTTC 001680
001681 TCACTTATAT GTGGAGGCTA AAAAAGTTGA TCTCATAGAA GCAGAGAGTA GAACACTTAC CAGAGGTGGA ACTTTATAGG 001760
001761 CGTTGTTACA ACCAAGACTC AGATTGCTCC GCTTCCCAGG TTCACACTAT TCTCCTGCTT CAGCCTCCCA AGTAGCTGGG 001840
001841 ATTACAGGTG CCCACCACAA TGCCCGGCTA ATTTTTTCTA TTTTTTAGTA GAGACAGGGT TTCACCGTGT TAGCCAGGAT 001920
001921 GGTCTCGATC TCCTGACCTC GTGATCCGCC CGCCTCAGCC TCCCAAAGTG CTGGGATTAC AGGCTTGAGC CACTGCTCCC 002000
002001 GG
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Predicted Small Protein

Name NONHSAT115847_smProtein_1106:1372
Length 89
Molecular weight 11397.4415
Aromaticity 0.284090909091
Instability index 79.3215909091
Isoelectric point 8.35052490234
Runs 10
Runs residual 0.0177272727273
Runs probability 0.0487546369899
Amino acid sequence MYMCIYIYTHIYTYIHTYIHICIHTHIRIHVYIHIYVYMYTYIRICVYVYIHTYIHIYTY
IHIYTYIHIYAYIHIYAYIHIYVLYIYI
Secondary structure LEEEEEEEHHHHHHHHHHHEEEELLLEEEEEEEEEEEEEEEEEEEEEEEEEEEELLHHHH
HHHHHHHHHHHHHHHHHHHHEEEEEEEL
PRMN LHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHH
HHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo TTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTTTiiiiiiTTTTTTTTTT
TTTTTTTTTTTTTTTooooooooooooo