NONHSAT116161
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT116161 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
647 nt |
Genomic location |
chr6-:169300112..169304944 |
Exon number |
2 |
Exons |
169300112..169300476,169304663..169304944 |
Genome context |
|
Sequence |
000001 AAAAGTTTAA ATACTTAGTG TTCATTCATA ATGTGTAGTT GTATTATGAG CCCAAATTGT TTATGATAAT TTTTACAAAG 000080
000081 ATTCACATTT GTCCTCATTT AGAATTCATA CAGAGCTTCC TGATGTGCAG AGCTCACACC CCACTTAGGC CTTGTTTGTT 000160 000161 AACTGAATAA TAGTCATTTT CTGTTGCACA ACAGTTAACC GCTAAGAAAA GGCATGGTCA GGCTAATTCT TTGACTGTAG 000240 000241 CTCTCTATTC ATTTTATGGT CACAACCATA TTCCATGATC ATAGCACATG GCCTTTGTCC TCATATTCCC TCCGCTTCTC 000320 000321 TGGGTGTCTA AATCCCTGCC TCTCTTTTAT AAGGACACTG CTTATAAAAG GACCCAGGAT GACCTCATCT CAAGATCCTA 000400 000401 AACTTAATCC CATCTTTCCA AACAAACTCA CATTCCCAGG TTCCAAGGAT GCCGGCCTGC ACGTTATCTC TGGGGTCACT 000480 000481 ACTTAGCCAA TTATACCTGG TGAACTGCAG ATTGAAGTAA GGGAAAAGAA ATCACCAGAA ATATGCATTA AATTGAGAAG 000560 000561 ATCACTACCA GGGTAATTTT ATGGACTCCC ACGGCTTTAA ATCTCATCTG TGTGCTGATT CCAAAAGTTC TCCCTCCAGC 000640 000641 CCAGAAC |
Predicted Small Protein
Name | NONHSAT116161_smProtein_287:400 |
Length | 38 |
Molecular weight | 4361.1099 |
Aromaticity | 0.162162162162 |
Instability index | 66.5948648649 |
Isoelectric point | 9.39739990234 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0489565195449 |
Amino acid sequence | MAFVLIFPPLLWVSKSLPLFYKDTAYKRTQDDLISRS |
Secondary structure | LEEEEELLLLLEELLLLLLLLLLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |