NONHSAT116588

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	NONHSAT116588
Source	NONCODE4.0
Same with	,
Classification	intergenic
Length	4622 nt
Genomic location	chr6_cox_hap2+:1739435..1746752
Exon number	7
Exons	1739435..1739570,1739800..1739957,1740270..1740480,1741077..1741352,1741460..1741576,1742168..1742215,1743077..1746752
Genome context
Sequence	000001 ACGATCCCGG CACTACAGTC CCGGCGCAAC CACCCGCACT CAGATTCTCC CCAAACGCCA AGGATGGGGG TCATGGCTCC 000080 000081 CCGAACGCTC CTCCTGCTGC TCTTGGGGGC CCTGGCCCTG ACCGAGACCT GGGCCGCGAC TCCGTGAGTC CGAGGATGGA 000160 000161 GCGGCGGGCG CCGTGGGTGG AGCAGGAGGG GCTGGAGTAT TGGGACCAGG AGACACGGAA CGCCAAGGGC CACGCGCAGA 000240 000241 TTTACCGAGT GAACCTGCGG ACCCTGCTCC GCTATTACAA CCAGAGCGAG GCCGGTATGA ACAGTTCGCC TACGATGGCA 000320 000321 AGGATTACAT CGCCCTGAAC GAGGACCTGC ACTCCTGGAC CGCCGCGAAC ACAGCGGCTC AGATCTCCCA GCACAAGTGG 000400 000401 GAAGCGGACA AATACTCAGA GCAGGTCAGG GCCTACCTGA GGGCAAGTGC ATGGAGTGGC TCCGCAGACA CCTGGAGAAC 000480 000481 GGGAAGGAGA CGCTGCAGCA CGCGGATCCC CCAAAGGCAC ATGTGACCCA GCACCCCATC TCTGACCATG AGGCCACCCT 000560 000561 GAGGTGCTGG GCCCTGGGCC TCTACCCTGC GGAGATCACA CTGACCTGGC AGCAGGATGG GGAGGACCAG ACCCAGGACA 000640 000641 CGGAGCTTGT GGAGACCAGG CCTGCAGGGG ACGGAACCTT CCAGAAGTGG GTGGCTGTAG TGGTGCCTTC CGGAGAGGAG 000720 000721 CAGAGATACA TGTGCCATGT GCAGCATGAG GGGCTGCCAG AGCCCCTCAC CCTGAGATGG GAGCCGTCTT CTCAGCCCAC 000800 000801 CATCCCCATC GTGGGCATCG TTGCTGGCCT GTTTCTCCTT GGAGCTGTGG TCACTGGAGC TGTGGTTGCT GCTGCGATGT 000880 000881 GGAGGAAGAA AAGCTCAGGC AGCAATTGTG CTCAGTACTC TGATGCATCT CATGATACTT GTAAAGAGGA CTATGCCTGT 000960 000961 TCCTGTTCTG GTGTCTGCGT TCTGATCTCT TTCTCCCCTG GGTGTCCCTC ATCTCTGACA GCAGCAGGAG TCATTTTTCC 001040 001041 TGTCATTAAC CCCACAAGGT GGAAGGCAGC CCCTGCACAC AGAAGTCTGT GGTATTAAGA GATGAATTTT CAAGCCCATG 001120 001121 CAGCTTTTAC CCTATTTCCA GGGCTCTTTC TTGGATTGTA TTTTCTGTCT TTTCCCCAAC TTTTTAAAGG AACTAGATTC 001200 001201 TGAAATTAGC AGAGAAGAGG GACGCCACAA GTTCTCATCT TAGGTAACTT TCTAGTGGAA CTCCTCTTCT GCTCAGCTCT 001280 001281 CCTACCCACT CTCCCTTCCC TGAGTTGTAG TAATCCTAGC ACTGGCTCTA ATGCAAACTC ATGGATCTAT AAAGCAAAGT 001360 001361 CTAACTTAGA TTTATATTTG TTTGGAAATT GGGATTCATA GTCAAAGATT GTTCTTTCCT AAGAGGGAAA TATAATTGCA 001440 001441 TGCTGCAGTG TGCAGAGGGG TTGGTGTGAA GGAGGGATGC GGGGAGGGAG GGAGGCAGGA CACACAAGCA GCACTGCTGG 001520 001521 GAAAAGCACA GGCGGCCTGG ATGTCAGTGT GAGGGGACCC TGTGCTGTCG TTGCTGCAAA ACCGCATTTG GCCTGAGGCT 001600 001601 ATGTTAATAA AGATACTGCC TTTAGAATAG GAGGTGCTCT ACAGTGAtca ttcattcagc caacatttgc tgtctgccag 001680 001681 acatatgaca gaatgttttt gcatctgggg aaagtcattg aactaaaatc agaaaaatct ctagccttgt ggagcatgtg 001760 001761 ttccagtggg aagaggcaga cggtacatac actctaatat atgcagagta aatgaggaaa gtgttagaag gtgataagtg 001840 001841 ctgtggaaca ggtgatcaga gtatgggttg tgggacagag aaggtagcta ttgtgccggg gtggtcagcg tgggccttgt 001920 001921 tgggaaggtg acctttgatg aaatatttga aggacataaa ggaatttgtc atgagggtat ctggaagaag ttttttctag 002000 002001 ggagtaggaa ccttcagtgt cagtgtacca gggcaggatc atgtctgtgt gttctgggaa gaacacggga tcgggtatgg 002080 002081 ctagagcaga gagtcactga gataaggtca ggggtttggt cagatcatgt gggcataggg ctcgagtatg tgggaaggat 002160 002161 tttgattttg aatgagatag ttttaagcag aataaagaca tgccacaact tctcttttaa aaggatcact gtagctgctc 002240 002241 tgctgagaac agaatccaaa ggccggcgat gagcaaggca ggtgggaaaa ctgtaggaaa tgagtgcagt atttcaggct 002320 002321 ggagatgtca gttacttcaa ctggggtgtg agcagtggaa atagtgggac gtgattggat tcctactatt tccaatcact 002400 002401 ttataccgca ttttctaatg gactaaatct ggggtatgag aagagtaaag gataccaaaa atgtcagact gtgactaaaa 002480 002481 agagttgcca tcagctgaga atgagaagac tagcaggagc atatgagagg aggggacgtc gcaggcagtc actatgggag 002560 002561 atgtgggatc tgagatgccg ctgagaaata ccagtgaggt agtcgggttg gcagttggac agatgaatct ggagacattt 002640 002641 aggagaaata gacttgggag gtgatgtcat ataaaagtta tttaaagcct tgagtctgaa tgacgtctcc aagggagtga 002720 002721 ttggctgtag aagagaacag gaacaaggac tgaacactag gCCTCTGTTG CTAAAGGATC TGATCAGACA ACACACCTAG 002800 002801 ATCAGACTGC ACAGTCCTGA CCCCACATCT AGAAGGTACA TAAACCAGGG AGttctagac tttcctgtgg acaggaatca 002880 002881 cctggacatc accttaagtc taagctgatc tggaatcgag aatgagattt cctacttata taatgttgct gttggcgctg 002960 002961 atgctgctgg tcttcagatc ccacttttgg tagcaagAAC ACAGACCAGG ATTCCTAGGC TAtgcatcag cctcgcctgt 003040 003041 gaggcttgtt aataagcaat tcctgcactc catgcgcaac attctgacac aggggcatct gtggagaggc ctgagtattC 003120 003121 TACAACAAGC CCACAGCAAA CCTGGTGCTC AGCCAGATTT GATATCACTG AGATCAGTAG TTGGAGAATG CCCAGGATGG 003200 003201 GGAGGGGTCT CAGACCCACA TTTAAGTGTT GCTTTATTCT GGGTTTttta tttatttatt tatttattta tttTTAAGGA 003280 003281 GGATGTGTTT CTTTAATTAT AAGACAGGAT GCTGAGAGAT AAATGTCATT TTCTCTATCA TGGGGTATAG CCAGATGGAA 003360 003361 GATTGAGAAG TGGCTCACAG CTCAGCAGAA TGAAAAAATA TCTGAACGCT GCTTTCTGAA ACTACTCTCC AGAATGATTT 003440 003441 CACACTCACT CATTGGAGCA AACAATGACT TGCAAATTTT TCTAATTTAA ACATAAAGGA GTGTACATAT TGGTATTAGT 003520 003521 ATTCATTTTA TTTTGGGGAA GGGCACTGTA TTAGTCCAta gtccgttttc acactgccga taaagacata cccaacattg 003600 003601 ggaagaaaaa gaggtttaat tggacttaca gtcccatttg gctggggagg cctcagaatc atggtgggag gcgaaaggca 003680 003681 cttcttacat ggtggtggca agagaaaatg aggaagaagc aaatgccaaa acccctgata aacacattgg atctcaggag 003760 003761 acttattcac tatcatgaga atagcatggg aaagactggc ccccatgatt caattacctc cccctgggtc cctcccacaa 003840 003841 catgtgggaa ttctgggaga tacaattcaa gttgagattt gggtggggac acagccaaac cacatTGGAC ACagaaccag 003920 003921 gtttgaagct acacagccag gaacataatc cacagccacc ctaattcaga tctctcatag gaaccactgt ccctgctcct 004000 004001 gagcacagat gctactgcat atacctctga taccctgatg gccgatactg ggccctgtgg caaagactgc tatcactgct 004080 004081 gctcctgaga actgctccac tactgctcct cagccatctt taccaaaatg cagtatttac tgtcccagcc tctctgtgtc 004160 004161 atctcatcct gattagaagc ccacatgtgg ttatctaaat tgtgcagcca aagcctcttg cagtgtttaa ctgcaataat 004240 004241 gttggggaaa gtgaattttt ctcctttgta gaaggaggta gtccctgcct tctaataaga ctcttcaaca taggaagaga 004320 004321 attcagttgc tggaggtaga ggggtgaggg atggaaaaag aatgacaaat ttcAATTCCT AGAATCATGT TCTGAGACTA 004400 004401 GAACTTTATC TAGTACATTG CAGGCACCTG GGTTTGGTTG AGTGTATAAT AAATGACATA GTTCAACTTA TTCCCTTGAC 004480 004481 AGTTTGTTTT GGGGTCCAGC TTTTGTCTAC CCCAGTTTTC TCACACAGAT ACGTGGAGAA GCATTGTGTG GTGGTAAAAT 004560 004561 GATTACTTGA AAGCCTTTTT CCCTATCTTT GTCCCTTGCT AGGATTAAAA ACCCATATCT GT

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