NONHSAT116747

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT116747

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1682 nt

Genomic location

chr6_cox_hap2-:3204432..3206901

Exon number

4

Exons

3204432..3204747,3204937..3205086,3205567..3206139,3206259..3206901

Genome context

Sequence
000001 GGGCGCCCGA CAGGGACCTC ACAAGCCCCC AAGCAGGGGC AACAGGTGTT TTGGAGATTA GAGACCCTAG CCTTGTTCCT 000080
000081 CAGGCTCCTC TTAAAGAATC TGACCCCTGA GGGTGCTGGG TAGAGTGAGG TCGACAGGAG CGGAAGGTCT GGAGTGGGTG 000160
000161 GGGCGGAGTG GGAGGGACGC CTAGAGATGG CAGGAGGAAG ACCTGGGCGC TCTTAACCAC CCCCAACGCC CTTGTCTGCA 000240
000241 TGTCTTTTTC TCTGTCTCCT CCTTTTCTGT TTCTTCTCCC AGACAGGTGA AGAAACAAGA AAACTAAGAA ATCCGAGCGG 000320
000321 TTGGAGGGGG AGTCTGTGTG GATGGGATGG GGACGCCGGG GGAGGGGCTG GGCCGCTGCT CCCATGCCCT GATCCGGGGA 000400
000401 GTCCCAGAGA GCCTGGCGTC GGGGGAAGGT GCGGGGGCTG GCCTTCCCGC TCTGGATCTG GCCAAAGCTC AAAGGGAGCA 000480
000481 CGGGGTGCTG GGAGGTAAAC TGAGGCAACG ACTGGGGCTA CAGCTGCTAG AACTGCCACC TGAGGAGTCA TTGCCGCTGG 000560
000561 GACCGCTGCT TGGCGACACG GCCGTGATCC AAGGGGACAC GGCCCTAATC ACGCGGCCCT GGAGCCCCGC TCGTAGGCCA 000640
000641 GAGGTCGATG GAGTCCGCAA AGCCCTGCAA GACCTGGGGC TCCGAATTGT GGAAATAGGA GACGAGAACG CGACGCTGGA 000720
000721 TGGCACTGAC GTTCTCTTCA CCGGTGAGGC TGGGGGGAGG CATAGGTCTT GGCACAGGGA AGTAGAGTTT GGGAGACTCG 000800
000801 GCCGTCTGGA GCCTTGTTTC TAACTCACTC CCGCCCTCAA ACCTCCGCGG CCTCCCGGAC TCAGGCCGGG AGTTTTTCGT 000880
000881 AGGCCTCTCC AAATGGACCA ATCACCGAGG AGCTGAGATC GTGGCGGACA CGTTCCGGGT GCGGAGCGGG ACCAGCCTAG 000960
000961 GGAGGGAGGG GGTGCAGGTG GGGGTCGGAA GGGCCTGGGC GCCCGCTGAG GAAATGAGAG GCAGAGAGCA GCCTATGTTT 001040
001041 GAAGATACCC CATCACCCCT CCCGCGCCCC TGAATACCTC CCTTCGCTCT CCCTAGGACT TCGCCGTCTC CACTGTGCCA 001120
001121 GTCTCGGGTC CCTCCCACCT GCGCGGTCTC TGCGGCATGG GGGGACCTCG CACTGTTGTG GCAGGCAGCA GCGACGCTGC 001200
001201 CCAAAAGGCT GTCCGGGCAA TGGCAGTGCT GACAGATCAC CCATATGCCT CCCTGACCCT CCCAGATGAC GCAGCTGCTG 001280
001281 ACTGTCTCTT TCTTCGTCCT GGGTTGCCTG GTGTGCCCCC TTTCCTCCTG CACCGTGGAG GTGGGGATCT GCCCAACAGC 001360
001361 CAGGAGGCAC TGCAGAAGCT CTCTGATGTC ACCCTGGTAC CTGTGTCCTG CTCAGAACTG GAGAAGGCTG GCGCCGGGCT 001440
001441 CAGCTCCCTC TGCTTGGTGC TCAGCACACG CCCCCACAGC TGAGGGCCTG GCCTTGGGGT ACTGCTGGCC AGGGGTAGGA 001520
001521 TAGTATAGGA AGTAGAAGGG GAAGGAGGGT TAGATAGAGA ATGCTGAATA GGCAGTAGTT GGGAGAGAGC CTCAATATTG 001600
001601 GGGGAGGGGA GAGTGTAGGG AAAAGGATCC ACTGGGTGAA TCCTCCCTCT CAGAACCAAT AAAATAGAAT TGACCTTTTA 001680
001681 GA
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Predicted Small Protein

Name NONHSAT116747_smProtein_1265:1522
Length 86
Molecular weight 9099.5968
Aromaticity 0.0941176470588
Instability index 68.7364705882
Isoelectric point 8.51434326172
Runs 13
Runs residual 0.0163992869875
Runs probability 0.0456497221204
Amino acid sequence MTQLLTVSFFVLGCLVCPLSSCTVEVGICPTARRHCRSSLMSPWYLCPAQNWRRLAPGSA
PSAWCSAHAPTAEGLALGYCWPGVG
Secondary structure LEEEEEEEEEEEEEEEELLLLLEEEEEELLLLLLHHHHLLLLLLLLLLLLLHHHHLLLLL
LLLLLLLLLLLHHHHHLLEELLLLL
PRMN -
PiMo -