NONHSAT116772

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT116772

Source

NONCODE4.0

Same with

,

Classification

antisense,sense

Length

2030 nt

Genomic location

chr6_cox_hap2-:3447343..3449628

Exon number

3

Exons

3447343..3447557,3447642..3448680,3448853..3449628

Genome context

Sequence
000001 CTCCTTCGTG AAGCTCACAC CTCCCCCGCC CCGGGAGGGG TTTGCCCGCC ACTGTCGCTG AATGATTGCA TCATCGAAAG 000080
000081 CAGAAAACCA CTTTTGCATC CTTCGGCCTC TGGCGTGCCT GCCATGACGT CATAGCTCTG CGGAGGTGGA AGTTGGGGAG 000160
000161 CTTTGAGGTA ACTGGATTCT TGATCTGAGC GCAGACGTCC TTCCTAACCT CACTGCATTT GGAGGACCTG GAGGGAGGGT 000240
000241 GGGTGAAGGG CAAGGAAAGA GGCAGGATGA GAGCTTGGCC GCGGTGGCGT CTGAGGGGCC TGAATGTTTC AAGGCCAGAG 000320
000321 CCTGGCGATC AGGTGGCTCG CTTAGTCCTA AACCAGTCAT CCTTCTCCAG GCCTCCTCTG TAGAATGGAA ACTCTGTACC 000400
000401 CCTGCTTGTC TTAGGACCTC ATGGATCCCA GGGGGACCAA GAGAGGAGCT GAGAAGACAG AGGTAGCTGA GCCTCGGAAC 000480
000481 AAACTACCTC GTCCAGCACC TTCTCTGCCC ACAGACCCTG CCCTCTACTC TGGGCCCTTT CCTTTCTACC GGCGCCCTTC 000560
000561 GGAACTGGGC TGCTTCTCCC TGGATGCTCA ACGCCAGTAC CATGGAGATG CCCGAGCCCT GCGCTACTAT AGCCCACCCC 000640
000641 CCACTAACGG TCCAGGCCCC AACTTTGACC TCAGAGACGG ATACCCGGAT CGATACCAGC CCCGGGACGA GGAGGTCCAG 000720
000721 GAAAGGCTGG ACCACCTGCT GTGCTGGCTC CTGGAACACC GAGGCCGGTT GGAGGGGGGT CCAGGCTGGC TGGCAGAGGC 000800
000801 CATAGTGACG TGGCGGGGGC ACCTGACAAA ACTGCTGACG ACACCGTATG AGCGGCAGGA GGGCTGGCAG CTGGCAGCCT 000880
000881 CCCGGTTCCA GGGAACACTA TACCTGAGTG AAGTGGAGAC ACCGAACGCT CGGGCCCAGA GGCTTGCTCG GCCACCGCTC 000960
000961 CTCCGGGAGC TTATGTACAT GGGATACAAA TTTGAGCAGT ACATGTGTGC AGGTGAGTTG CCCCTGCTTC ATAGCCCCCT 001040
001041 TCCCCTTCCC AGAGGTTGAG AGCCCCCCAC GCCTGCTGCT GCTTCTCTCC TTGTGCAGAC AAACCTGGAA GCTCCCCAGA 001120
001121 CCCCTCTGGG GAGGTTAACA CCAACGTGGC CTTCTGCTCT GTGCTACGCA GCCGCCTGGG AAGCCACCCT CTGCTCTTCT 001200
001201 CAGGGGAGGT AGACTGCACA GACCCCCAAG CCCCATCCAC ACAGCCCCCA ACCTGCTATG TGGAGCTCAA GACCTCCAAG 001280
001281 GAGATGCACA GCCCTGGCCA ATGGAGGAGT TTCTACAGGT TCAGGATCGG GGTGGGCAGG GCGAGAGCTT AGGCTTGAAG 001360
001361 GCTGGGAAAG GGACTTGGGG AGGAGGGTGA AGGCAGAATG GAGGGTGCAC GAGGGGTCCC ACTGATCCCT TGCTTTTCCT 001440
001441 GTCAGACACA AGCTCCTGAA ATGGTGGGCT CAGTCATTCC TCCCAGGGGT CCCGAATGTT GTTGCTGGCT TCCGTAACCC 001520
001521 AGACGGTTTT GTCTCTTCCC TCAAGACCTT TCCTACCATG AAGATGTTTG AATATGTCAG GGTAAGGGAA CGATGTTGCA 001600
001601 GCTCCCACCC GTATCCCCAA ACACCAAGAC CACAGGTCTA GCATCCAGGG CAACAGCCTG CCTTCTCTCC TCCCACCACC 001680
001681 CCCACTGCCC ATCTTCTGCC TCCTCCTCTG CCTGCTCCAG AATGACCGTG ACGGCTGGAA TCCCTCTGTG TGCATGAACT 001760
001761 TCTGTGCCGC CTTCCTTAGC TTTGCCCAGA GCACGGTTGT CCAGGATGAC CCCAGGCTCG TTCATCTCTT CTCTTGGGAG 001840
001841 CCTGGCGGCC CAGTCACCGT GTCTGTACAC CAAGATGCAC CTTACGCCTT CCTGCCCATA TGGTATGTGG AAGCTATGAC 001920
001921 TCAGGACCTC CCATCACCCC CCAAGACTCC CTCTCCCAAA TAGTAATGCT TTAGAGGGAG GCAGTCATAT CTCTGTGTGC 002000
002001 AGATAATAAA AGCATATTTC TAAGAGGTTC
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Predicted Small Protein

Name NONHSAT116772_smProtein_1592:1756
Length 55
Molecular weight 5449.273
Aromaticity 0.0
Instability index 75.1740740741
Isoelectric point 8.96820068359
Runs 7
Runs residual 0.0330623306233
Runs probability 0.0164408105585
Amino acid sequence MLQLPPVSPNTKTTGLASRATACLLSSHHPHCPSSASSSACSRMTVTAGIPLCA
Secondary structure LLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLEEEELLLEELL
PRMN -
PiMo -