NONHSAT116843

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT116843

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

716 nt

Genomic location

chr6_cox_hap2+:4556381..4559374

Exon number

2

Exons

4556381..4556544,4558823..4559374

Genome context

Sequence
000001 GCAACTGATA GAGGATTTTC TTACATTTGC TTTATTTCAT GTTGCTGCCC AAATTCATGC TGTACCCTCA GCAGCAAGGA 000080
000081 TTGGGACCAT TACTCCTGGC GTTCCCAGAT GGAACAGACA CCAAGCCTGG CTTTGCCACT GAACACAATA CAGGACTGAT 000160
000161 AAAGgaaata gaggctgccc atctctcagt gccacacatg agaaagggaa gttgtcattt tatatatcca ctgttaagca 000240
000241 tcttggtaaa acagaagaaa gcaggctggg cctggtggct catgcctata atcccagcac tttgggaggc caaggagggc 000320
000321 agatagcttg accagcatgg gcaacatggc aaaatcccgt ctctacaaaa aaataaaaaa aacaaaaaat aaatgtagtc 000400
000401 ccaggtactg aggaagctga ggcaggagga tcacttgagc ctgggaggta aaggcttcag tgagccgtga taatgccact 000480
000481 gcactccagc ctagacagca gagtgagacc ctgtctcaag aaaaagaaaa acaagaggga ggcaatctac tttgtaccca 000560
000561 gagaatttta catgcaagga atttgactat gaatgagcct ccattgctta agagagactt cactatttgg gattttaaga 000640
000641 aagaaataca caaacaagca aatctcatca gcagaggact gagaaaccag tgtttataat acccagtgat taatgt
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Predicted Small Protein

Name NONHSAT116843_smProtein_38:325
Length 96
Molecular weight 10720.6265
Aromaticity 0.105263157895
Instability index 45.5526315789
Isoelectric point 9.20733642578
Runs 11
Runs residual 0.0132615002072
Runs probability 0.0454143983557
Amino acid sequence MLLPKFMLYPQQQGLGPLLLAFPDGTDTKPGFATEHNTGLIKEIEAAHLSVPHMRKGSCH
FIYPLLSILVKQKKAGWAWWLMPIIPALWEAKEGR
Secondary structure LLLLLEELLLLLLLLLLEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLLLLLLLLH
HHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -