NONHSAT117299

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT117299

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1494 nt

Genomic location

chr6_mann_hap4+:1660994..1662711

Exon number

3

Exons

1660994..1661082,1661152..1662411,1662567..1662711

Genome context

Sequence
000001 GGCGCTGCGG GAGGCCCTGG AGCGCGGCGG TGATGGCGGG GCCGGTGAAG GACCGCGAGG CCTTCCAGAG GCTCAACTTC 000080
000081 CTGTACCAGG CCGCCCATTG TGTCCTTGCC CAGGACCCCG AGAACCAGGC GCTGGCGAGG TTTTACTGCT ACACTGAGAG 000160
000161 GACCATTGCG AAGCGGCTCG TCTTGCGGCG GTGAGACAGC CACGGGGCGG GCGGCGGGCG GGACGCGGGA GGAACGCGAG 000240
000241 AGGGAGCGCG GGCGCCAGAC CACTATCCTC CTCCGCCCCC AGGGATCCCT CGGTGAAGAG GACTCTCTGT CGAGGCTGCT 000320
000321 CTTCCCTCCT CGTCCCGGGC CTCACCTGCA CCCAGCGCCA GAGACGTGAG TGCTCCAACG GAGGTGGAAG ACTGCGGAGC 000400
000401 ATTGGGGGCG CGGAGGGGGG CGGGGTGGGG GGCGGGCACT GGAGGCCAAC AGCGCCTTTC TCACTGTAGA TGGATGTTGG 000480
000481 GTGTGGGATT CGCAGGAGTC TTCCTTCTTC GGGTTTGGAT TAAGTTCCTA ACGCCACTTG CACAAACTAG GGTTTGGGCT 000560
000561 CGGCTTTTTT TTTTTTTTTT CTTCCAGTGT GGGCAATAAA TAATAACTTT TAAGAGGCAA CCCCACCCAT GCACAATAAT 000640
000641 AGATGTTGTT CGGCTTTGTG GAGGACGATT CCCATCACCa ttcatttatt aagcaaatac ttattttcta aaatgtgtca 000720
000721 ggtactgtgc tagATTCATT ATTCTCATTG AAATTACGGT CTGATGGGAC AGACTAAGAA ACAAAATGGT GTAGAAAAAG 000800
000801 ATTAACTGGG GGAGTAGAAT GCTCACTTAC TCATGCCAGT GGTGGCGAAG TTTATGATAA GCAAAGGGAG TGAGAGATGG 000880
000881 AAATTCTAGg catgtgtgca gactctgaga caagagagct tgtggtgctg tcaaagaaat gagagttcag gaggctggag 000960
000961 tttgaggtag gagggcaaaa catgagactg gagggggaaa caggccagtt cttgaagTCT TGTTAGGGAG TTTGAACTTT 001040
001041 ATCTTAAAGA GTTCCAGGAA ATCGATGGAG CTTATGCCGA GGCCTGACAC CATCAAATGT GCATTCAAAT TGGGGGTGTG 001120
001121 GTGGGGGAGC GGGGATACCT ACTGAAAAAC ACTGGAGGCA AAACTGGCAG CAAGAGACCG TTACTTCTAA ACGTGGACAG 001200
001201 TCTTTTTCCC ATGTTCACCC TAGGCTGCAG GGGACAGCGC TGGACCGTAC AGACCTGCCT AACATGCCAG CGCAGCCAAC 001280
001281 GCTTCCTCAA TGATCCCGGG CATTTACTCT GGGGAGACAG GCCTGAGGCC CAGCTCGGGA GCCAAGCAGA TTCCAAACCA 001360
001361 CTACAACCCT TGCCAAACAC AGCCCACTCC ATTTCAGACC GCCTTCCTGA GGAGAAAATG CAGACGAAGG GTTCCAGTAA 001440
001441 CCAGTGATGG ATTCACCTCA TCTCCCAAAT AAAGTTTACT TGTTTTACAT TCCA
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Predicted Small Protein

Name NONHSAT117299_smProtein_1289:1471
Length 61
Molecular weight 6664.5298
Aromaticity 0.0833333333333
Instability index 77.0333333333
Isoelectric point 10.530090332
Runs 7
Runs residual 0.0330673758865
Runs probability 0.0472909884675
Amino acid sequence MIPGIYSGETGLRPSSGAKQIPNHYNPCQTQPTPFQTAFLRRKCRRRVPVTSDGFTSSPK
Secondary structure LLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLEELLLL
PRMN -
PiMo -