NONHSAT117301
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117301 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
621 nt |
Genomic location |
chr6_mann_hap4+:1661009..1662711 |
Exon number |
4 |
Exons |
1661009..1661082,1661152..1661427,1662286..1662411,1662567..1662711 |
Genome context |
|
Sequence |
000001 CCTGGAGCGC GGCGGTGATG GCGGGGCCGG TGAAGGACCG CGAGGCCTTC CAGAGGCTCA ACTTCCTGTA CCAGGCCGCC 000080
000081 CATTGTGTCC TTGCCCAGGA CCCCGAGAAC CAGGCGCTGG CGAGGTTTTA CTGCTACACT GAGAGGACCA TTGCGAAGCG 000160 000161 GCTCGTCTTG CGGCGGTGAG ACAGCCACGG GGCGGGCGGC GGGCGGGACG CGGGAGGAAC GCGAGAGGGA GCGCGGGCGC 000240 000241 CAGACCACTA TCCTCCTCCG CCCCCAGGGA TCCCTCGGTG AAGAGGACTC TCTGTCGAGG CTGCTCTTCC CTCCTCGTCC 000320 000321 CGGGCCTCAC CTGCACCCAG CGCCAGAGAC GCTGCAGGGG ACAGCGCTGG ACCGTACAGA CCTGCCTAAC ATGCCAGCGC 000400 000401 AGCCAACGCT TCCTCAATGA TCCCGGGCAT TTACTCTGGG GAGACAGGCC TGAGGCCCAG CTCGGGAGCC AAGCAGATTC 000480 000481 CAAACCACTA CAACCCTTGC CAAACACAGC CCACTCCATT TCAGACCGCC TTCCTGAGGA GAAAATGCAG ACGAAGGGTT 000560 000561 CCAGTAACCA GTGATGGATT CACCTCATCT CCCAAATAAA GTTTACTTGT TTTACATTCC A |
Predicted Small Protein
Name | NONHSAT117301_smProtein_416:598 |
Length | 61 |
Molecular weight | 6664.5298 |
Aromaticity | 0.0833333333333 |
Instability index | 77.0333333333 |
Isoelectric point | 10.530090332 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.0472909884675 |
Amino acid sequence | MIPGIYSGETGLRPSSGAKQIPNHYNPCQTQPTPFQTAFLRRKCRRRVPVTSDGFTSSPK |
Secondary structure | LLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLEELLLL |
PRMN | - |
PiMo | - |