NONHSAT117573

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT117573

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2791 nt

Genomic location

chr6_mcf_hap5+:800373..804535

Exon number

3

Exons

800373..800551,800916..801010,802019..804535

Genome context

Sequence
000001 ACTGCCCAAC TGCCACTGCC CAGCCTGATG GCTCCACATC TCAGGAGTAG GCTCTGATTC CTTGGGGCCC CAGGAGCCTC 000080
000081 TCAGGAGTCT ACATCCCAAG ATGTTCTAAC TTCCAGAGTC TCCAAGCCCA TCAAGAGCAA GTTTTGCTAA AAGTGTTCTG 000160
000161 AGAGCTTATG AAGCACATGG ACAAGGAAGG GTTGTGCATC CGGCTTTCCA CCTTAAACTG GTTTCTATGG TGCTTCATCG 000240
000241 ATGAGATAAG GATGCATAGG AGACCCCAGG CCAGGAGTTC CTTCAGGACA CACTGTCCTA GGCCTGGGCC CTGGAGGAGG 000320
000321 ACATGGTGAT GAGGCACCCT GAGGCCTCCA TGGGGGAACT GAGAAGCATG CACTGTGACC TGCACACCCA GGTGGGCTTC 000400
000401 AGCACCAAGT CTCCTCCTGT GTCACCCTGC GGGGCAGTAA ATAGTGGGAA GTGCCCAGAC CTCACCAGCC CTGCTCCCTG 000480
000481 GGCCTTCCTC CAGCCCCTCC TCTCCCTCCT CCTCTAAGAA GCTTCTGAAA CCAGGCTGCC TGAGCCTAGG GCAAAAGCTG 000560
000561 ACCTTGGGTT TACTGGACAT GCCTCAGAGA CAATGAGACG TGAGCAAGAC TCTTCCAAGC CCCTCCCCTG TACCCTCCTG 000640
000641 CTCTCACTCC TGAAAGCCCC AGAAGGACAC TGGAGGGGTC AGATCCATCT GTGCAAGCCC ACAACCACAC CTGTGAGTAC 000720
000721 CAGCAGCCCT GGAGAGCAGC AGGGGGCCTT CACTCCTGAG CACCCCTCCA AGGGCCTAAA ATCAGTGTCA GAGACCCTAA 000800
000801 GAGAATCTAG GGAGAGGGCA TAGGTGAAAC CCTGGCCCAG AGCCAGAATT GATTGCTCAG CTGAGTGTGG GAACAGTCCA 000880
000881 GCCCTGGCAT GGAGATCCCC CAGAGGAGTG GAGGGTGTCT CATCCACTGT GGAGATAAGC CCCCATATTG CGTGGCAAAG 000960
000961 GGGCTAGGTA ACAGTTAAGG CCTCATCCAT CTGAGCTCTG AATCAAGGCT AAAGCCCAGG CTAAGCAGCC CTGGGGCAAG 001040
001041 AGTGTGAGGC AGGAAGACTG AGTCAGCCTG AACCCTGGGG GCTGTCCCTG GAGTGACTTG AGCTTCCCTG ACAGCTTCCC 001120
001121 CACTCTAGGC TGCACACACA CCTCGCTCTG GGAGTAGCAG CCTGCAGGAG TGTCCTCAGC ATTAGACCAG GGGGACCACA 001200
001201 CGGGGACCCT GAGGACTGCA GGGACCCAGG TCTGTGGGGT CCAGCCTGGC AAAAGCAAGA TGTTCTCAAT GGAAAAGCTG 001280
001281 ACCAAATCTG CTTTCCTTTC AGCCAAACCT GAGCAAGCAC CCCCACCACC CAGGCCTCTG CAGATATCCC CCAGCATTGA 001360
001361 GACCCTCCCC AAGGGGATGG GCTGCTTCTC CCTGGCCCAC AGCCCAGCTC CAGCAGCCCA TGGGTATAGC CCTCCTGAAA 001440
001441 CAGGAGCCTC ATCCTCCCTC ACCCTCACCT GGCTATGCTG TACCCAAGGC CAAAGCCCAG AGGCATAAGG GAGCTTCTGC 001520
001521 AGAGCCCAGG ACAGCAGGCT GCTCTCTGGG GGCCCTGGGG ACTCAGAGTG TGGCCAGCCC ATCCCCAGCT CAGGATAGAC 001600
001601 CACAGAGTGC TTGGTGATTC CTGCATTGGA ACTCCCTCTC TAAGCTCCCC ATGGACCTGG ACCTCAGAGG CCTGTGGTTT 001680
001681 TCACAGTAGA GCTTGGAGCA GAGATGCTAG GCCCCTATCA CTTCCATATG TGTCCTGGAC ACCTCTAAGA TCATAGGACT 001760
001761 GGCCTAGCCC CCAATACCAG ACACTGCCCA GCCCCCTGAT AGCCCAGAGG TAGGGCCAGA GACAACTCTC CTGCATGTGA 001840
001841 TGCCTACAGC TGATCACTCT TGGCAGACAG TGAACATCAC GGCCCAGAAG GAGCCAGGGC AGCACTTGGC AAGCTGCCCC 001920
001921 AAAGCCCCAG AGAGCTCCTT AGACATGGAA AGTCAATACT GATGGGGAAG CTGGACACTT GGAGGCCACT GGAGGGAGGG 002000
002001 GTGAGCATGG TGTCCCCACA GCCCAGGCCA CCCAGCAGCA TGCCCTGCAT CCATGGTCCC AACCTGTAGG GCAGAACCCC 002080
002081 CCTCTCAACG CACAATTCCT AGACCCAGAG GGCCCTAGCC CAGACTCAAC CTGAGCCCTG AAAGGGAAGG GGCACCAGGG 002160
002161 GTGCCTTGGG GCCTCCAGCA GCAGCCAAGA TACACAGGAG ATGGAGCCCC CTGTGGCCCT GGCCAGAACT AGTATTTGGC 002240
002241 TTAAGGCGGA GCAAGCCCCC TTGGAGCACT GCGTACATAC CCGGGGCCTA TGTGTGCCTG GCAAGGCCAA GCTGATGATG 002320
002321 TTACCAAGCT CAAACTACCA CTGGCCACCT TGGTGAGGGT GGGGCAGAAA CACGTGGACC AGCCACCAAC CTCATCCATT 002400
002401 CAAGGAAGCA GAAATGGTCA GGCTCCTGCA GGATAAGTGG CCACCACCAG ACCACCAATG GGGCAGAGTT CTGAGGCCCA 002480
002481 AGCAGATGGC ACTGGGGCCC TGCTTCCAGG GTCCACAATC TGCTCCAGGA CACAAGACTG AAGAAAACTA AGCAAATGAG 002560
002561 AGTCCAGGAG GCTGGATCCC TCATCTGCCA TTCTTGGCAG TTGCATTTTG TGGTCAGAAA AAGTCAGGAA ACTTGGCTCT 002640
002641 ACTCACTGCA GGAGGCTCCA AGGTGGGACC AGAGCTTCCA GCATAGATTC AACAATGCCT AAGAATGCCT CTTCTTGGGG 002720
002721 AAAAGGACCC CTTCCTTGGC CTCAAAGCCC CCACTTATTT TGATTAAAGC ACAATAAAGT CTTTGTTGTT A
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Predicted Small Protein

Name NONHSAT117573_smProtein_1259:1507
Length 83
Molecular weight 8583.759
Aromaticity 0.0609756097561
Instability index 77.6231707317
Isoelectric point 6.69793701172
Runs 9
Runs residual 0.0261456023651
Runs probability 0.030353883295
Amino acid sequence MFSMEKLTKSAFLSAKPEQAPPPPRPLQISPSIETLPKGMGCFSLAHSPAPAAHGYSPPE
TGASSSLTLTWLCCTQGQSPEA
Secondary structure LLLHHHHLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLL
LLLLLLLEEEEEEELLLLLLLL
PRMN -
PiMo -