NONHSAT117584
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117584 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
428 nt |
Genomic location |
chr6_mcf_hap5-:1015472..1017360 |
Exon number |
2 |
Exons |
1015472..1015749,1017211..1017360 |
Genome context |
|
Sequence |
000001 AGGAAATTTC TGGTGGGCCT TCGCGGCTCC GCTGGGTTGG CAGCCGCTTG AGCCACTGCG AGGAAAGCAA AGTCTGGGCC 000080
000081 ATGGAGATGA GCCTAGTCCT GCTGTTCCTG ATCCGCACTG CCCTTTTTGC ACCCCAGGGA GCTGCTGCTG acggcgcctc 000160 000161 cctctgtcgc caaagttgga gtgcagtggc gcggtctcgg ctcactgcaa gctccgcctc ccggattcaa gtgattcccc 000240 000241 tgccttagcc tcctaagtag ctgggattac aagtgcccac caccacaccc ggctaatatt ttgtatttta atagagactg 000320 000321 ggtttcacca tgttgaccgg gatggtctca atctcctgac ctcgtgatct gcctgcctaa gcctcccgaa gtgctgggat 000400 000401 tacaggcgtg agccaccaca cctagctg |
Predicted Small Protein
Name | NONHSAT117584_smProtein_80:247 |
Length | 56 |
Molecular weight | 5830.8052 |
Aromaticity | 0.0545454545455 |
Instability index | 51.7727272727 |
Isoelectric point | 11.4000854492 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0322461498933 |
Amino acid sequence | MEMSLVLLFLIRTALFAPQGAAADGASLCRQSWSAVARSRLTASSASRIQVIPLP |
Secondary structure | LLHHHHHHHHHHHHHHLLLHHHHLLHHHHHHLHHHHHHHHHHHLLLLLEEEELLL |
PRMN | - |
PiMo | - |