NONHSAT117607
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117607 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
9789 nt |
Genomic location |
chr6_mcf_hap5-:1361740..1384674 |
Exon number |
2 |
Exons |
1361740..1371420,1384567..1384674 |
Genome context |
|
Sequence |
000001 cagagggatg cccaggatga ggtgaagacg atcttggaaa tcagcccaga tgtgcatgca ccagtccacg tgtggcagga 000080
000081 ccaagggaag tgtcttcaca aagatgaggc tttgatttgt tggagaaact gttaccagaa aaacaggtcc cgatcccgac 000160 000161 cccaaaagag tattcttgga tcttgcacag gaaggaatta aaggtgagtc acagagtgca gtgagaagga gatagtttat 000240 000241 tgaaagttac tcagatacag agtaggtgtc ctcagaaagc aaaaggaaga atgcaccatc tttgttgtaa actcttctaa 000320 000321 tgtaggggtt taatctacat aaaagctaag ttaaatgtct atgtgtgggt gctctgacag catgacaaaa tttaggacct 000400 000401 attgatttaa agaaagttat ccttggcatt ttagttagta tatcaaagca tgactataat aatcttaaaa gcatatatta 000480 000481 taatgtgacg tcaggacatg tggacattct gttgtctgtc ataggcgttt gttcttgcag gcattattaa gttgtttaat 000560 000561 cagctgtaaa cctcttatga ccatgggttg tgactggcaa ggaatatgcc ttgctagttg aaagatggag ttgactttaa 000640 000641 aatggtgtca ccctggctct cctatgcttc tgtttcccca aaaaagccag gttacttgtc ctgtagaatg atccacattc 000720 000721 tgagtttggc taatgacatt ctcatggtat taacttgttt ctttatatgt tgttttttct gtTACCCACA AAATAATTCT 000800 000801 TCTGATACAC ATTTGTAATC TTACCATGCC AGCATCTGCT ACTCTTCATG TTACCAAATT TCTGTTCAAG GACCACTAAA 000880 000881 GCCACAGTCA GTGGACATTC TGAGACCTCT AGGGGAGGGT GGAGATGCTG TCCTTTAATA TAGTCTGACC CAAGCAACCT 000960 000961 CCCCACTTGG CATGGTGAAT CTAGACAAGC TAAAGAATTT ACTACGCCCC AGGCCTGCAC CAGCCCTCTC CTAAGACCTT 001040 001041 GGGCACTCTC ATTTCCCTTT TTTTTTTTTC TAAAGGAAGT CATAGTTTCT CATAACCTTT GCTAGTGATC CTGGACCTTG 001120 001121 GTTGTTCCCT GAGGCTGTGT TCTCCACACT GCTGCCATCA CTGCTACAGC AGAGGTGCAG AAAGCTCAGG AGAGAGAAGG 001200 001201 GAGGAAAAGC TGAAGATTTT GTGTTATTCA TGCTTTCCTG ACTCCGGCGA AAGTGCTTCC TCCACCTGCA ACCATTTCTG 001280 001281 TTTCTATACT GCTGAGTCTT GTGTTCCCAA GACCAAGGGA AGCCCATTTT CTTTAAAGCC AGTCACAGTT TCTGTTGGCT 001360 001361 GATGGAATAT CTGTTGTCCA GCAGTTGTAT TCCTGCTCAC AAATGCAAAA CAGTTTGATG CCACGCACAT TCCAGGGCTT 001440 001441 AGACTGGAAA TGCTGTCCCT TGCCCCTTTG TTACCTTCTG ACAGGGATCA GTCCATAGTG TAGTTGGTGT CACAACAGTC 001520 001521 CCGAAGAAGC CTTCCAATAG ATACCCAAAT GTGATTCAAA GTGGCACAGG CACACACCAC GGTGCCACAT GGTGCCTATG 001600 001601 TAAAGCAGGT ATATCAGGAA TGCTAAGCAG AGAAGTAGCA GAACACACTG ATCCCCATGT TCTCATTGTA CAGTTGGGTG 001680 001681 CAATTAAGCT GGCACAATGG ACTCTTCTCA TGGCTACTGT TCCAGTAGTG TGGATGCCCC CAAATGCTGC ATATTTACTA 001760 001761 GGACAGCCAG GCAGAGACAG CTGTGTACTA TGATACAACA GTAGTCCCTC TTAGAGGAAG TGACCTTGTT AGAAGTGGGA 001840 001841 GTTTCTGAAG CTCTTCAGCT GTTACTGGCC TGCTCTTCCA TAGCGTTACT TCAGACCTGC TGGCCCAGCT ATCCACTCCG 001920 001921 CTAACAGGTC TGTCTCTGCT AACAGGTCTA GCTCTGTCTC CTCAGCACAT GTTCTAGGCT CTGACTGCAA GTGCTGACTT 002000 002001 GGGCTCCCAG CCCCACACAG ACCCTCtgtt ccatgaaagg gccatctatg caaagtgccc cccaaatgcc aaaggagcca 002080 002081 ataaaccaag gaacaagaca gacaaatcta gttgtcagta aagagtgttt tattggggaa cttacagaca gaagcgtggt 002160 002161 cttggatggc aggaagacag gtaggtttct gcacttatta cccccacacc cagggcttat ataccacagg ggaagagtat 002240 002241 acatgctctg tgcaagacaa aggctactac tgtccagaac aggtaagaat gctaatgtgt catagcctag aatttgtata 002320 002321 acatcaaggt tgacatgttc ttacaatagg gatggtaaat aaagtgggaa tcaggagtca gtcctgggac tggggctaat 002400 002401 cagaagtcag catagagaat tagcatccaa gagggagtca cttttctctc cacaTCCCAG ccttctaatc cagctcttac 002480 002481 aatctcatgg actcacattt cccccatagt ccctgagcct tcagagaggg CTGTGGGTGA CATTTTGATG GTGTGAGTGA 002560 002561 CACATTTTAT CAATTTGTTT TCTACTTGTT AAGCAGGGGC CACAGCAACA ACACAAACAA CAGGCGATGA TATGTATGCC 002640 002641 AGGTGTAAGA CACAGAATTA AAAATGCCCT TTACCATGTT TATTCAGGAA CCAAACCAAG AGGTATAGAG CAGAACAACA 002720 002721 ATAGGAACAG AAGACTATGG GTGGAATTAA AAATGTTTAG TAGGTATTTG GTGGGGCAGT TCTTCCCCAT TAAACAGAAT 002800 002801 TACTGGTAGC TCCATCTCTG TTGATTAGGA ACATAGGATT GTGGGCTGGG AGTACACACC AAACATGTTG CCTGAGGGGC 002880 002881 AAAGGCGCTG GTATTATGTG TAAGGTTACA GGGGCAGCAA AGGACCATGT CAAATGGCCA GCCAGGGTGC TTCTTAAAAG 002960 002961 GGACTGTGTT CCAGTTTATT GGTATGTGGA GTGTTTTGGC CCAGACTTCA GCAGGATCAA TGGAGACCAC TTTAGTTGGT 003040 003041 AGGGAATTCC TTGCTGTCTG GAAAGAAATG CTCTATCCAA CATAGGGGAA GTTGCTAGTC CAACCCCCAT TCAAGTGTCT 003120 003121 CCTCCCTGGC TCAAGATCTT GAGGAGTTCT AAATAACCTT TGCCATTGGC CTTTTATCTG CTCAGGTCAG AGATGCATCT 003200 003201 GGTTGGACTT TCTTTACTAT TATGGTTAAT GGATCCATCT CTGTGGTGGT CCTGAGTCAT TGGTGTGGTG CCAGCACCAT 003280 003281 ATTTGTCTCA actaaattaa ggtttctaat ggcttgaggc aaaatctttg tctaactatg aaagatattg gattttgaga 003360 003361 gtgctcaaaa ctgtgccttc aaaataccat ttttcctttc aatcaaccct gttgcttggg ggagtataca gtaagtgaaa 003440 003441 tacccagtct atgtcccttt catgcatcca gtcttggaca ccgtgtctgg tgaaatgcat gcctcgattg ctatcaatat 003520 003521 gtggagggta tccttacatg acactgagtt gctccaagcc cctgatggtg gctgtttggt ttgctcttac aagggaaagc 003600 003601 ttgcaacaat cccatggcag tgtatacaca tgttagtgca tactttcgtc tcaagattac tggcaagggt ctgatgtagt 003680 003681 ctatctacca gtctgtcaca ggggtggctg tcttatgtat atgtccaggt gtatgtggga tgtggcagag gtacagacgg 003760 003761 gaacaaatta agcagtttgc taccgccacc actaaatctg catagcagag agccaatcct gctccctttg ctatTTGGCA 003840 003841 GCCCATTCAT GCACTGAAAT CCCCACTGTG ATATGTACCT AATCAACTAG CTCAGTATTC TAATTTTTGC TAGGATGTCT 003920 003921 GCCTCCATGT TTCTGGGAGG TGAATCTGAC CAGTGTGCTG AAGCAATTAG GTCCACAGTG GGTTCCTGTA GACTTTTCCA 004000 004001 Aatgtctttc cacataccag ctccccataa ggatttttaa attatatacc aatcatctca ggccctttgg gcaagccaaa 004080 004081 ttgtaagacc cttaagtact gccagactgt ctgtacagag aactataggt ggtggctcac gggtacaaac caaccatgta 004160 004161 gcttggagtt ctgcccattg actgctctgt tgcattccca tctcaaacca gatactgtct gtggttgtgc agctactact 004240 004241 gtccatacac agggttacct tggctcaatg catctaagta ccaagcatta tcaggaatga gggccatgcc ttcatgtacc 004320 004321 attggagaca tctcctgtga gggctccaca ataggggcag cactggactc ataatgtact ggccctaaga tagcatgcag 004400 004401 ttcatctctt aagggatgca tggagaaggc actatgttgt tgcatgtatg catggcactt ttgtaaagtg gaaacttggg 004480 004481 caatagctga tacaggcctg gcaaacactc ctacccagtc cttgatagga aacctgttct ccctggtacc aggaaagcag 004560 004561 cagttatgga ttcaacttgt ggcaagacct tctatatccc caggacctgt tattcaactg ggaaatagca ggtttcagta 004640 004641 cccttccatt aattgtgact aaaattctaa aggaactgct tcccTATGCT GGACTTTATA TTTTCATCAT CCAAAATTAT 004720 004721 AGTTTAGTTT TACCTTTAAA AATATGTTTT TTGTTCTCAT TTGTTCCATA GGTTTCTCCT TGaaatttat attgtatggt 004800 004801 aaggtttcct attgtttgca ttttgtggat tgcacgccaa ggtgtggttt aatgtatttc tattacctgt attttctgta 004880 004881 aattggtagt ttggtataga ggtttgtgta cattcagggt tttttttttt CTGTAAGTAT TGATGGTTCt gtaaaaggaa 004960 004961 aataaaatct tggggcccca aaattactaa gctaaaggga aaagtcaagc tgggaactgc ttagggtaaa cctgcctccc 005040 005041 atctgttcag agtcgcccct ctgctcactg agataaacac atgtctgatt ccctcatttg gaaaggctaa tcggaaactc 005120 005121 aaaagaatgc aaccatttgt ctctcatcta tctgtgacct ggaagccccc tccttgcttc gagttgtccc gcctttccag 005200 005201 acggaatcaa tctttagctt acatatgttg atcactgtct catgtcccct taaaatgtat aaaaccaagt tgtgctctga 005280 005281 ccaccAAAGT TGTGCTGAGA AGTGACACCA AAGAACATGG TGGCATAAGA ACTCCAAGGA CCCCTCCCCT CCACAGCGGC 005360 005361 AATGTGCTTG TTGAAACACC AGTATAAAAA AACTTGATGA GAGCTGTGAT TGGATTTAGT GTTGATATAt tttttgtaaa 005440 005441 ttgtggtaaa acatgcatac tatataattt accttctaac cattttttca gtgtacaatt tggtggcagt aagcacattt 005520 005521 acagtgttgt gtaaccaccg ccaatatcca tttccagaac attttcatca tcccaaacag aaactgtacc cattaaacca 005600 005601 taactgccca ttctccctac ccccagcccc tggtaatctc tattctattt tctgtttcta tgaatttgct tattctagct 005680 005681 actttatata agtaaaatat catatttgtt tttatttctg gcttatttca cttatagtgt tttcaaggct catccaatta 005760 005761 gaatttcatt cacttttaag gctgaataat attccatgct tatgtgcacc gtgggttgtt tatccagtca tcctctgatg 005840 005841 gacactcggt tgcttccacc ttttggatat tgggtatagt gctgctatgg gcctgagtgt acacatatct gggtgagttc 005920 005921 ctgctttcag ttcttttggg tatgcccaaa agtggaattg ttggctcata tagtaattct atttttactt tcttgaggaa 006000 006001 tcactattct gttttccatg gtggctgcac cactgtatac tctcaccagc agtgtacaag tgttccagtt tctccatatc 006080 006081 ttcaccaaca cttggcctag tgaagtttac catattttta tgtccttatt ggcattcctt tttttttttt ttttgtgaaa 006160 006161 cagagtcttg ctctgttgcc aggctggagt gcagtggcac aatctcggct cgctgtaacc tccacttccc aggttcaagt 006240 006241 gattctccta cctcagcctc ctgagtagct gggactacag gtacctgcca ccatgcccaa ctaatatttg tatttttttg 006320 006321 gtacagacgg ggtttcacca tgttggccgg gatggtcttg atctcttgac ctcgtgatcc gcccacctcg gcctcccaaa 006400 006401 gtactgggat tacaggcatg agccaccatg cctgaccagc attccttatt tttatgtcct tattgtatat cttctttgga 006480 006481 gaattgtcta ttcatgtctt ttacttattt ttgaatgaga ttgttttgct attgttgaat tgtagttctt tacatattct 006560 006561 ggatattaat tctttatcag atatgtgatt ggcaaatatt tcctcctggt ctgtgcattt tcttttgatt ctcttaatag 006640 006641 tgtcctttga tgcaaaaaag tttttaaatt ttgatgcatt ctaatttgtc atttttctta tattacttgt actattggtc 006720 006721 accagccaag aaaccactac caattctaat gtccataaga ttttcctcag tattttcttg agggttttac aggttcaatt 006800 006801 cttaagatta gttctttgag tcattctgac ttaatttttg aaaagggtgt aatggaagga catgaatttt ttccagcatc 006880 006881 attcttttgc atgttgatat ccaggtttcc agcaccattt gttgaTGCAC CATCTGTTGC AGTGGGGCTG ACACATTTGT 006960 006961 AAGATGCAGT GAGCATTAAT ACATGGGAGC ACCATGCATT TATTTACCTG TCTTTACTTC ACAGTTGTTT TGAGAAGGCT 007040 007041 TTCACTGACA GACTCAACAG AAATGAATAT ATATGACTTC TTATAAAATC ATATTCAAGt aaaattataa attttaaaat 007120 007121 GTTAAGACTG GAGCAAGACT GGAACATCAC TAGACAAGCT GAAACATAGG CTGAAATGAA GGGTTATGTT TACCTTGCTA 007200 007201 CAAATTCTGT TGGCCCACAA TCTCTTATGC TTATTGCTTA AGAGAGCCAC AGAGTGGGGT GATAGCTCAC ATAACCAGTC 007280 007281 CCTGGTTTTC TGCTTCAGAA AGAAGTTTAA ATATTCTGCT TAGACAGAGT AAGGAAATTA ACTGAAAGAT GTCTAATGTG 007360 007361 AAGTTGGCAT CTACAAAGTG AAGGAGTGAG TAGTAAGTGT AAACATCAGG AATCCCAGGA GATTCTATCT TTTTGCACGG 007440 007441 AAATGGCCTC ACTATGCACT GCTGAAGGGA GAAGGTCCCT TCAGGGGACC TTCATGATGA AGAAGAACAC AATATGATAT 007520 007521 AGGAATTTTC TGCTGCAGCC CTAAACTGAA TTGTCCTTCT CTCTAACTAC AGGTCTCACA AAGTTTTATA GCTTCAATGA 007600 007601 TTTCACCTGG GCCAAGATTT TGGTTTTTTT GATGTTATTT GTTTGAACTG CTGCCTGGGG CTTAGAAAAG TGACTTGGAT 007680 007681 ATTTTGTCAA AATGGATTTT CTTTGATGGA ATGTGAAATC CGTAAACACT CTGCTTTCCT GCTGTATCCC CAGAGCAGGT 007760 007761 TGAGTACCTT GCACTTCTTC TCAGCACTTC GCTAGAAGTG GTAGAAGATT TGGAGTTAGG GCCTCCCTCA ATCCCTACCC 007840 007841 TTTCTTTAAT TCAGAGGATC ACAAACTGTT GGGAGAAGAG TGGTATCTTG GGCCTCTAGC TGATCTGATG AATATTAATA 007920 007921 TCCAATGTCC TGTAGTGAAG TCATGTGTGC GTGTAACATC ACTTCTTCAC GCAGTGTCAT AGGAAAGTGG GTTCCTGGAC 008000 008001 CCCAGGTTAA GAGCCTAAGC ACTAAAGGCA CAGAGCTAGA GCTCTAGGAG GGGAGGGATG GCTGGGGTGG AACCTCGTCT 008080 008081 TGTCATTTAG TCCTGGGGCC TTTTCACTCC TTACATGGTG GGTGGTGGGC GTCTGGCAGG TGCCGATGTT GATGGAGTCA 008160 008161 AGGGAGGGAA CTAGCCGGGA CAGGGAAAAA CAGGGTTGGA GAGATAATTA AGGTGGACAT TATTTTTTCT GAGCGTAAGT 008240 008241 CGTGGCTGGA AATCTGGAGA GCCTGAAAGA GTATCCCCCT ACCCAAACCT GTTTTTTCCT TTTCCCTCAA GCCTCATTTG 008320 008321 GCCACAGGCC CAGTGTCAAC ACCAGGGGGC GCCACAGACC ATGAAGGCGC CCACAGACCA TGAAGGCACC GTGCAGCTGG 008400 008401 GATTGTTTGT GGTCGGCTAC TGGGTCCCTG ACTTAACCAG GGgagccaag accctgtagc caagtggcct ggattcaacc 008480 008481 tgcagctcag gtcttactga cacttctccc cctggtgcct cagtttctta atctgtgaaa tggtgaggac attacagcat 008560 008561 ttacctctgg ggCgggtttc tcaacagcag cactattaac aatttgggac agagaatctt gtggagtggt ctgtcctgtg 008640 008641 cattgtggga ggtttgccag caacacccca ctcaccccct cccaccaatc cccatgtgac aaccgaaaat gtcccaggat 008720 008721 ttttaggtct cccttgggTC TAGAAGCTGC ACTTAGGCAT TTTCCCACCT GACACTTGAG TTCATCTCTG CTTTGGTCCA 008800 008801 CATAAGGCCA CTTTAAAAAA ATGTTGTTTC TTTAAAGATT CTAACCATCT TTTAAACAAA TCCATTTTCT TCCTCTATTT 008880 008881 CTGCATTCAG TTAATCCTTC CAAACCCTTT GTTTAGTATA TCTTGAAATG TATCAATTCC TGTTCTAGTA ATTAACATAT 008960 008961 GTGACTTGCA TGATATCTGC TATGACCCCT AGTAGAGCTC TGATTCCTTT AGCACAGGGA ATGTGTTCTC GATTCTGCTC 009040 009041 TGGATGATGT AAATCAATTT ATTTTACTTT ACTTGTCTGG GATGTTGCTC CTCATCTGTA AGATGTAAAT GTGGATATGG 009120 009121 CTTGGATTAC TAAGTGGTTT TATTTCTTAA TTCACCTGAC ATTTGTTGTG TGCCTGCTGC AAGTCAAATA CATGGCATGG 009200 009201 TATTGTTTCC TTGTTCACAC CACAGCAAAT GAGAAAATGA GACATTATAg ccaggtgtgg cggcacaggc ttgtggtcct 009280 009281 agctactcgg aaggctgagg caggagaatt gctccagccc aggagtttga ggttacagta aggtatgata tcaccattgc 009360 009361 atttcaacct gggcaacaga ccctgtctct gaaaaaaggg aaaaagaCCT TGTGAGCTGT CTACGTGTAC TCTATGTCTC 009440 009441 AGGAGACTCA TATCCTGTAA TTTTTCTAAA TGGCGTCTCC ATGTGGTCtt tcatgaatgt ttgtctggta ttctctatcc 009520 009521 ttttactttc aacttttctt taccttctac tgaaattatg tcttttgtaa acagcccatg attatttatt tagttattta 009600 009601 tttttacccc cctgcactat ttgtcttgta attggagtgt ctgagtccat tatgtttaat gtaattattg acctcattgg 009680 009681 gtttaagtct gtccattgtc atttgctgcc ttctaatatt atctctttct tgctcaacta tttttcttat gttaccttct 009760 009761 ttagatgaat aaaaaccttt gcattattg |