NONHSAT117702
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117702 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
753 nt |
Genomic location |
chr6_mcf_hap5-:2701429..2702363 |
Exon number |
2 |
Exons |
2701429..2701853,2702036..2702363 |
Genome context |
|
Sequence |
000001 TTCCTCGTGT TTCCTGATCC TGCCCTGGGT CTGTAGTCAT ACTTCTGGAA ATTCCTTTTG GTTCCAAGAC GAGGAGGTTC 000080
000081 CTCTAAGATC TCATGGTCCT GCTTCCTCCC AGTCCCCTCA CAGGACATTT TCTTCCCACA GGTGGAAAAG GAGGGAGCTA 000160 000161 CTCTCAGGCT GCGTGTAAGT GGTGGGGGTG GGAGTGTGGA GGAGCTCACC CACCCCATAA TTCCTCCTGT CCCACGTCTC 000240 000241 CTGCGGGCTC TGACCAGGTC CTGTTTTTGT TCTACTCCAG CCAGCGACAG TGCCCAGGGC TCTGATGTGT CTCTCACAGC 000320 000321 TTGAAAAGCC TGAGACAGCT GTCTTGTGAG GGACCGAGAT GCAGGATTTC TTCACGCCTC CCCTTTGTGA CTTCAAGAGC 000400 000401 CTCTGGCATC TCTTTCTGCA AAGGCACCTG AATGTGTCTG CGTCCCTGTT AGCATAATGT GAGGAGGTGG AGAGACAGCC 000480 000481 CACCCTTGTG TCCACTGTGA CCCCTGTTCC CATGCTGATC TGTGTTTCCT CCCCAGTCAT CTTTCTTGTT CCAGAGAGGT 000560 000561 GGGGCTGGAT GTCTCCATCT CTGTCTCAAC TTTATGTGCA CTGAGCTGCA ACTTCTTACT TCCCTACTGA AAATAAGAAT 000640 000641 CTGAATATAA ATTTGTTTTC TCAAATATTT GCTATGAGAG GTTGATGGAT TAATTAAATA AGTCAATTCC TGGAATTTGA 000720 000721 AAGAGCAAAT AAAGACCTGA GAACCTTCCA GAA |
Predicted Small Protein
Name | NONHSAT117702_smProtein_92:304 |
Length | 71 |
Molecular weight | 7389.2834 |
Aromaticity | 0.114285714286 |
Instability index | 77.6772857143 |
Isoelectric point | 7.71356201172 |
Runs | 8 |
Runs residual | 0.0305516265912 |
Runs probability | 0.0236486486486 |
Amino acid sequence | MVLLPPSPLTGHFLPTGGKGGSYSQAACKWWGWECGGAHPPHNSSCPTSPAGSDQVLFLF YSSQRQCPGL |
Secondary structure | LEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHEELLLLLLLLLLLLLLLLLLLEEEEEE EELLLLLLLL |
PRMN | - |
PiMo | - |